RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	AQP7P3	A6NL99	342 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	VSTM5	A8MXK1	200 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	ZNF587B	E7ETH6	402 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	AKR7A3	O95154	331 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	LGI1	O95970	557 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	GPI	P06744	558 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	CECR9	P0C854	216 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	UQCRB	P14927	111 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	PCMT1	P22061	227 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	KHK	P50053	298 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	CDH15	P55291	814 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	EMX2	Q04743	252 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	CEACAM7	Q14002	265 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	C3orf36	Q3SXR2	165 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	ZCCHC23	Q6ZST2	131 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	LSR	Q86X29	649 aa	Predicted RBP	13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	ZNF786	Q8N393	782 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	NUP37	Q8NFH4	326 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	OR8J2	Q8NGG1	315 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	EPS8L3	Q8TE67	593 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	APOPT1	Q96IL0	206 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	OCEL1	Q9H607	264 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	ZNF442	Q9H7R0	627 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	MOV10	Q9HCE1	1003 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-223	ENST00000515459	ZDHHC2	Q9UIJ5	367 aa		13.67	□□□□□ -0.22
LMNA-223	ENST00000515459		A0A0A6YYJ9	748 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	LIPT2	A6NK58	231 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	SLCO1B7	G3V0H7	640 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	hCG_2039718	K7EN88	272 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	FAAH	O00519	579 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	CPSF4	O95639	269 aa	Known RBP	13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	CALCR	P30988	508 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	SERPINB5	P36952	375 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	OR7A5	Q15622	319 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	SAXO2	Q658L1	398 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	TMEM225	Q6GV28	225 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	RINL	Q6ZS11	566 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	ANKRD46	Q86W74	232 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	GSPT2	Q8IYD1	628 aa	Known RBP	13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	VPS37A	Q8NEZ2	397 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	ZFAND2B	Q8WV99	257 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	WDR60	Q8WVS4	1066 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	BCL2L2	Q92843	193 aa	Predicted RBP	13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	DOK1	Q99704	481 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	MKS1	Q9NXB0	559 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	ASIC5	Q9NY37	505 aa		13.66	□□□□□ -0.22
LMNA-223	ENST00000515459	PRSS51	A0A1B0GVH4	220 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	PRAMEF27	A3QJZ7	478 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	CFAP73	A6NFT4	308 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	AGAP5	A6NIR3	686 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	OR6C65	A6NJZ3	312 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	NR5A2	O00482	541 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	SCN2B	O60939	215 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	VENTX	O95231	258 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	IGLV1-44	P01699	117 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	IFNGR1	P15260	489 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	NPR2	P20594	1047 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	CXCR1	P25024	350 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	ARRB2	P32121	409 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	CHI3L1	P36222	383 aa	Predicted RBP	13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	SELENOP	P49908	381 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	DVL1P1	P54792	670 aa	Predicted RBP	13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	TUBA1B	P68363	451 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	TUBA4A	P68366	448 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	LGALS3BP	Q08380	585 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	RIN1	Q13671	783 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	SMU1	Q2TAY7	513 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	ANXA8L1	Q5VT79	327 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	TUBA1A	Q71U36	451 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	SVOPL	Q8N434	492 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	FAM169B	Q8N8A8	192 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	UBASH3B	Q8TF42	649 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	NEURL3	Q96EH8	262 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	ANKRD27	Q96NW4	1050 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	RHOXF2	Q9BQY4	288 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	TAPBPL	Q9BX59	468 aa		13.65	□□□□□ -0.22
LMNA-223	ENST00000515459	MARCO	Q9UEW3	520 aa	Predicted RBP	13.65	□□□□□ -0.22
LMNA-223	ENST00000515459		A0A096LPE4	126 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459		A0A1W2PPZ6	126 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	SH3PXD2B	A1X283	911 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	HMGN4	O00479	90 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	VAMP5	O95183	116 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	IGKV3-15	P01624	115 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	HOXB1	P14653	301 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	IL7R	P16871	459 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	THBS4	P35443	961 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	HGFAC	Q04756	655 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	EPS8	Q12929	822 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	CCNI	Q14094	377 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	GNA13	Q14344	377 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	TRIP10	Q15642	601 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	ADRM1	Q16186	407 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	GSTA3	Q16772	222 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	NIPAL3	Q6P499	406 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	CREB3L2	Q70SY1	520 aa		13.64	□□□□□ -0.23

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