RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SLC7A10Q9NS82 523 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 PARPBPQ9NWS1 579 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 CCDC167Q9P0B6 97 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 VAPAQ9P0L0 249 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 SLAMF8Q9P0V8 285 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF232Q9UNY5 417 aa9.2□□□□□ -0.94
HMGXB3-205ENST00000514469 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 A0A1W2PP18 115 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 CIB4A0PJX0 185 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 CCT8L1PA6NM43 557 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 HMGB1P1B2RPK0 211 aaPredicted RBP9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 C5orf58C9J3I9 102 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 FTCDNL1E5RQL4 147 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 ABCD4O14678 606 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 AKR7A3O95154 331 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 PRKAR1BP31321 381 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 ATP5J2P56134 94 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 LTBQ06643 244 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 SPOCK1Q08629 439 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 SQLEQ14534 574 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 GCNT6Q5T4J0 391 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 TSPO2Q5TGU0 170 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 C1orf140Q5VVS0 124 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 DHRS4L2Q6PKH6 230 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 C6orf89Q6UWU4 347 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 DTX2Q86UW9 622 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 COMTD1Q86VU5 262 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 C17orf78Q8N4C9 275 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 OR52N5Q8NH56 324 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 NFKBIDQ8NI38 313 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 STK35Q8TDR2 534 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 DYDC1Q8WWB3 177 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 MUS81Q96NY9 551 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF385AQ96PM9 386 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 TRAF4Q9BUZ4 470 aaPredicted RBP9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 TAPBPLQ9BX59 468 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 IKZF5Q9H5V7 419 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF385DQ9H6B1 395 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 VIPAS39Q9H9C1 493 aa9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
HMGXB3-205ENST00000514469 A0A1W2PR80 420 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 VAMP5O95183 116 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 LY6G6DO95868 133 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 CD8AP01732 235 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 PTAFRP25105 342 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 HTR2AP28223 471 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 MPGP29372 298 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 CDKN1AP38936 164 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC25A3Q00325 362 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 HOXC5Q00444 222 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 EGR4Q05215 589 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 ETFDHQ16134 617 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 AGKQ53H12 422 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 C1QTNF12Q5T7M4 302 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 C9orf135Q5VTT2 229 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 REEP3Q6NUK4 255 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 KLHL17Q6TDP4 642 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 TMEM108Q6UXF1 575 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 Q71RC1 249 aaPredicted RBP9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 GPAT4Q86UL3 456 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 LSMEM1Q8N8F7 131 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 WDR31Q8NA23 367 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 POMGNT2Q8NAT1 580 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 CKAP2Q8WWK9 683 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 TRMT61AQ96FX7 289 aaKnown RBP9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 BOD1Q96IK1 185 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 RADILQ96JH8 1075 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 CPPED1Q9BRF8 314 aaPredicted RBP9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 GRIP2Q9C0E4 1043 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 SLCO5A1Q9H2Y9 848 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 TMEM38AQ9H6F2 299 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 C12orf10Q9HB07 376 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC17A5Q9NRA2 495 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 FAIMQ9NVQ4 179 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 ADPRHL2Q9NX46 363 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 CISD1Q9NZ45 108 aaKnown RBP9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 UPB1Q9UBR1 384 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 CORO2BQ9UQ03 480 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 MGAT4BQ9UQ53 548 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 AMDHD2Q9Y303 409 aa9.18□□□□□ -0.94
HMGXB3-205ENST00000514469 AHSA1O95433 338 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 IGHV4-39P01824 125 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 PNMTP11086 282 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 GPX2P18283 190 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 CD40P25942 277 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF83P51522 516 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 CDK6Q00534 326 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 TGFBR3Q03167 851 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 SCARB2Q14108 478 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 ADRM1Q16186 407 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 C11orf71Q6IPW1 123 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 C5orf46Q6UWT4 87 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 DLEU7Q6UYE1 221 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 B3GLCTQ6Y288 498 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 CREB3L2Q70SY1 520 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 AAED1Q7RTV5 226 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms