RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	EEF1A1P5	Q5VTE0	462 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TPRG1	Q6ZUI0	275 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	C6orf120	Q7Z4R8	191 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	MRPL38	Q96DV4	380 aa	Known RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	SEC22A	Q96IW7	307 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TIMP4	Q99727	224 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TCEAL7	Q9BRU2	100 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	TEX12	Q9BXU0	123 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	CHRD	Q9H2X0	955 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	IL21R	Q9HBE5	538 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	LHX3	Q9UBR4	397 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	NPFFR2	Q9Y5X5	522 aa		10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	COL4A4	P53420	1690 aa	Predicted RBP	10.29	□□□□□ -0.76
PDCD6-210	ENST00000513582	VCAN	P13611	3396 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	HYAL3	O43820	417 aa	Predicted RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	CSF2RA	P15509	400 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	GAL	P22466	123 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SDHA	P31040	664 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	MAGEB1	P43366	347 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	RIDA	P52758	137 aa	Known RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	RPS15	P62841	145 aa	Known RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	POLR2L	P62875	67 aa	Known RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	NDUFAF6	Q330K2	333 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	KRBOX4	Q5JUW0	171 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR52W1	Q6IF63	320 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	CDPF1	Q6NVV7	123 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	CD300LD	Q6UXZ3	194 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC44A3	Q8N4M1	653 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR10R2	Q8NGX6	335 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	RAD51AP1	Q96B01	352 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SAMD8	Q96LT4	415 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR14A2	Q96R54	314 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	HCAR1	Q9BXC0	346 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	TGIF2	Q9GZN2	237 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	NTNG1	Q9Y2I2	539 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PATJ	Q8NI35	1801 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PAPPA2	Q9BXP8	1791 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	RFPL4A	A6NLU0	287 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	RFPL4AL1	F8VTS6	287 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	HMGN4	O00479	90 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	IL5	P05113	134 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	ADH6	P28332	368 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PTH2R	P49190	550 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR2B8P	P59922	312 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	POU4F2	Q12837	409 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	BEND4	Q6ZU67	534 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMED4	Q7Z7H5	227 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR10H5	Q8NGA6	315 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR8S1	Q8NH09	359 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SNX33	Q8WV41	574 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PLD4	Q96BZ4	506 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLC25A38	Q96DW6	304 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	TMEM41A	Q96HV5	264 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	TAAR2	Q9P1P5	351 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	TAC3	Q9UHF0	121 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	ACAD8	Q9UKU7	415 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582		H7BY64	318 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	CCS	O14618	274 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	OR1F1	O43749	312 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	ABO	P16442	354 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	B4GALNT1	Q00973	533 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	CBFB	Q13951	182 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SSX2	Q16385	188 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PCGF3	Q3KNV8	242 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PRRT3	Q5FWE3	981 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	GRHL2	Q6ISB3	625 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	MED27	Q6P2C8	311 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	C22orf39	Q6P5X5	142 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	FIGNL1	Q6PIW4	674 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	NDUFAF7	Q7L592	441 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	HSD11B1L	Q7Z5J1	315 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SKA3	Q8IX90	412 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	AKR7L	Q8NHP1	331 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	TCTEX1D2	Q8WW35	142 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	NEIL2	Q969S2	332 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	ISOC2	Q96AB3	205 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	IGSF21	Q96ID5	467 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	PRAP1	Q96NZ9	151 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	GGACT	Q9BVM4	153 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	SLITRK2	Q9H156	845 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	CCDC86	Q9H6F5	360 aa	Known RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	FKRP	Q9H9S5	495 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	WSB2	Q9NYS7	404 aa	Predicted RBP	10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582		Q9Y3F1	56 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	INSL5	Q9Y5Q6	135 aa		10.28	□□□□□ -0.76
PDCD6-210	ENST00000513582	ANKRD20A5P	A0PJZ0	165 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	RHPN2P1	A8MT19	583 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	VEGFD	O43915	354 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	RAD1	O60671	282 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	ITGA10	O75578	1167 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	PCCB	P05166	539 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	RB1	P06400	928 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	FUT1	P19526	365 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	CPT2	P23786	658 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	P2RX1	P51575	399 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	PSMD4	P55036	377 aa	Known RBP	10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	RAB2A	P61019	212 aa		10.27	□□□□□ -0.77
PDCD6-210	ENST00000513582	GPNMB	Q14956	572 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms