RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 FGD3Q5JSP0 725 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 C1orf185Q5T7R7 199 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 C1orf140Q5VVS0 124 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 NSUN5P2Q63ZY6 315 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OR2T5Q6IEZ7 315 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ZFP1Q6P2D0 407 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 B3GNT6Q6ZMB0 384 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 WDR88Q6ZMY6 472 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ADGRE4PQ86SQ3 457 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 DOLPP1Q86YN1 238 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OR5M9Q8NGP3 310 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OR2T29Q8NH02 315 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OR6S1Q8NH40 331 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 MFSD8Q8NHS3 518 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TMEM255BQ8WV15 326 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TMEM239Q8WW34 195 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ACOT11Q8WXI4 607 aaPredicted RBP6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ZHX1-C8orf76Q96EF9 292 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TUBA1CQ9BQE3 449 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 PTDSS2Q9BVG9 487 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 CHID1Q9BWS9 393 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TAPBPLQ9BX59 468 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 REEP1Q9H902 201 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ARMC1Q9NVT9 282 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ALKBH4Q9NXW9 302 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 RHCGQ9UBD6 479 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 SH3BGRL2Q9UJC5 107 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TINAGQ9UJW2 476 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 OSGIN2Q9Y236 505 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TRAPPC4Q9Y296 219 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 MED31Q9Y3C7 131 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 ZNF175Q9Y473 711 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 TESMINQ9Y4I5 508 aa6.8□□□□□ -1.32
HMGXB3-204ENST00000513318 A0A087WUU8 490 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 TRBV4-1A0A0J9YWV2 114 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 MBD3L4A6NDZ8 208 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 MBD3L3A6NE82 208 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 MBD3L5A6NJ08 208 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 LIPT2A6NK58 231 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC22A20A6NK97 555 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 ENO4A6NNW6 628 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 FTCDNL1E5RQL4 147 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 E9PLN8 166 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 KPNA4O00629 521 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 HNRNPRO43390 633 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 DEAF1O75398 565 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 CST1P01037 141 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 IMPDH2P12268 514 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 FCGR1AP12314 374 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 PTNP21246 168 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 GNLYP22749 145 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 GTF2E2P29084 291 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 RPS5P46782 204 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 UQCRFS1P47985 274 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 UGT2B15P54855 530 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 CARD18P57730 90 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC35A1P78382 337 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 PON3Q15166 354 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 OR7A5Q15622 319 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 EIF2S3LQ2VIR3 472 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 C1QL3Q5VWW1 255 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 ABLIM2Q6H8Q1 611 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 PPP4R4Q6NUP7 873 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 MTFR2Q6P444 385 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 PAQR6Q6TCH4 344 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 ZNF730Q6ZMV8 503 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 RRM2BQ7LG56 351 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 P4HA3Q7Z4N8 544 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 RNF113BQ8IZP6 322 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC43A2Q8N370 569 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 LINC00471Q8N535 108 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 MBD3L2Q8NHZ7 208 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 FNDC9Q8TBE3 224 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC7A13Q8TCU3 470 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 RNF128Q8TEB7 428 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 OSTF1Q92882 214 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 RELTQ969Z4 430 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SLCO4A1Q96BD0 722 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 KTI12Q96EK9 354 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 DNAJA3Q96EY1 480 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 ZNF845Q96IR2 970 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 ZFP3Q96NJ6 502 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 TRIB1Q96RU8 372 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 VKORC1Q9BQB6 163 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 NAA11Q9BSU3 229 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SRXN1Q9BYN0 137 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 PRRG4Q9BZD6 226 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 DENND2DQ9H6A0 471 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 FKRPQ9H9S5 495 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 CALHM2Q9HA72 323 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 KRCC1Q9NPI7 259 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 MEPEQ9NQ76 525 aaPredicted RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 TMCC3Q9ULS5 477 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 TMEM5Q9Y2B1 443 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 SAMHD1Q9Y3Z3 626 aaKnown RBP6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 AP4S1Q9Y587 144 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 FAM215AQ9Y5M1 114 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 CORINQ9Y5Q5 1042 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 LYVE1Q9Y5Y7 322 aa6.79□□□□□ -1.32
HMGXB3-204ENST00000513318 HEATR1Q9H583 2144 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms