RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RELTQ969Z4 430 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 MIB2Q96AX9 1013 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 ADGRG7Q96K78 797 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 MOGAT1Q96PD6 335 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 SLC29A1Q99808 456 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 NIPSNAP1Q9BPW8 284 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 RBM4BQ9BQ04 359 aaKnown RBP11.26□□□□□ -0.61
PDPN-210ENST00000513143 RBM4Q9BWF3 364 aaKnown RBP11.26□□□□□ -0.61
PDPN-210ENST00000513143 COQ10BQ9H8M1 238 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 SMURF2Q9HAU4 748 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 C8orf4Q9NR00 106 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 USE1Q9NZ43 259 aa11.26□□□□□ -0.61
PDPN-210ENST00000513143 A0A1B0GTH9 108 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 OR14I1A6ND48 311 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 EFCAB9A8MZ26 197 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 H0YC42 278 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 EIF1AYO14602 144 aaKnown RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 CDC42EP2O14613 210 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 EI24O14681 340 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 TNFSF11O14788 317 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 SEC14L5O43304 696 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ALPLP05186 524 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 POU2F1P14859 743 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ZNF26P17031 533 aaPredicted RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 FUT1P19526 365 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 GSTM3P21266 225 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 PTDSS1P48651 473 aaKnown RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 DIO1P49895 249 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ALDH3A2P51648 485 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 TPD52P55327 224 aaPredicted RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 COX10Q12887 443 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 DAG1Q14118 895 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 MFSD13AQ14CX5 517 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 OR7A5Q15622 319 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 PRR30Q53SZ7 412 aaPredicted RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 PDSS1Q5T2R2 415 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 C10orf53Q8N6V4 93 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ATG16L2Q8NAA4 619 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 OR2V1Q8NHB1 315 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 GTPBP3Q969Y2 492 aaKnown RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 SARAFQ96BY9 339 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 DNAJA3Q96EY1 480 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 SLX1AQ9BQ83 275 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 TAPBPLQ9BX59 468 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ZNF556Q9HAH1 456 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 NANSQ9NR45 359 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ASF1BQ9NVP2 202 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 KIF17Q9P2E2 1029 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 TMEFF2Q9UIK5 374 aaPredicted RBP11.25□□□□□ -0.61
PDPN-210ENST00000513143 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 ZGRF1Q86YA3 2104 aa11.25□□□□□ -0.61
PDPN-210ENST00000513143 TTLL8A6PVC2 850 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 SULT2B1O00204 365 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 DNPH1O43598 174 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 HPRP00739 348 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 TSPAN19P0C672 248 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 SAGP10523 405 aaPredicted RBP11.24□□□□□ -0.61
PDPN-210ENST00000513143 SLC9A3P48764 834 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 CARD18P57730 90 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 OR2B6P58173 313 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 RAC3P60763 192 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 CSNK2A1P68400 391 aaPredicted RBP11.24□□□□□ -0.61
PDPN-210ENST00000513143 SLC35A1P78382 337 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 HSF1Q00613 529 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 NFATC3Q12968 1075 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 FHL1Q13642 323 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 SNCBQ16143 134 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 HBMQ6B0K9 141 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 KLHL17Q6TDP4 642 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 MAMDC2Q7Z304 686 aaPredicted RBP11.24□□□□□ -0.61
PDPN-210ENST00000513143 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
PDPN-210ENST00000513143 UBQLNLQ8IYU4 475 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 LRRC17Q8N6Y2 441 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 PACRGLQ8N7B6 248 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 SCAIQ8N9R8 606 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 OR10D3Q8NH80 312 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
PDPN-210ENST00000513143 OSTF1Q92882 214 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 SLC25A36Q96CQ1 311 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 UCK2Q9BZX2 261 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 TNFRSF10DQ9UBN6 386 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 REV1Q9UBZ9 1251 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 POFUT2Q9Y2G5 429 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 CORINQ9Y5Q5 1042 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 SPENQ96T58 3664 aaKnown RBP11.24□□□□□ -0.61
PDPN-210ENST00000513143 SHANK1Q9Y566 2161 aa11.24□□□□□ -0.61
PDPN-210ENST00000513143 UNC119BA6NIH7 251 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 BCKDKO14874 412 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 CXCL13O43927 109 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 PTP4A3O75365 173 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 TP53P04637 393 aaPredicted RBP11.23□□□□□ -0.61
PDPN-210ENST00000513143 HIST1H2ABP04908 130 aa11.23□□□□□ -0.61
PDPN-210ENST00000513143 IGFBP5P24593 272 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms