RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MAGEA8P43361 318 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 CLK1P49759 484 aaKnown RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 RNF144AP50876 292 aaPredicted RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 CCR4P51679 360 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 H3F3AP84243 136 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 EMX2Q04743 252 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 LGALS3BPQ08380 585 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 MERTKQ12866 999 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 SKP2Q13309 424 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 CGB2Q6NT52 195 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 RINLQ6ZS11 566 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 USP43Q70EL4 1123 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF786Q8N393 782 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF614Q8N883 585 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 MTERF3Q96E29 417 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF317Q96PQ6 595 aaPredicted RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 SNX18Q96RF0 628 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 KCNS3Q9BQ31 491 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 EBF4Q9BQW3 602 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 THUMPD3Q9BV44 507 aaKnown RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 KATNB1Q9BVA0 655 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 NPHS2Q9NP85 383 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 SLC7A10Q9NS82 523 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 SIRT3Q9NTG7 399 aaPredicted RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 ACER3Q9NUN7 267 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 TMED5Q9Y3A6 229 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 HDGFL3Q9Y3E1 203 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 CRYAAP02489 173 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 ALDOCP09972 364 aaKnown RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 OR4A8P0C604 315 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 G6PDP11413 515 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 DDX5P17844 614 aaKnown RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 PGCP20142 388 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 APOBEC1P41238 236 aaKnown RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 SEC24CP53992 1094 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 RIN1Q13671 783 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 PTGR1Q14914 329 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 LSM12Q3MHD2 195 aaKnown RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 C3orf36Q3SXR2 165 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 C9orf135Q5VTT2 229 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 CASP12Q6UXS9 341 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 SPATA19Q7Z5L4 167 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 GLCCI1Q86VQ1 547 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 ADAMTS15Q8TE58 950 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 MAELQ96JY0 434 aaKnown RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 SLC38A2Q96QD8 506 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 RBM4Q9BWF3 364 aaKnown RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 NMUR2Q9GZQ4 415 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF696Q9H7X3 374 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 FAF1Q9UNN5 650 aaPredicted RBP12.09□□□□□ -0.47
SPCS3-204ENST00000513139 TRAPPC4Q9Y296 219 aa12.09□□□□□ -0.47
SPCS3-204ENST00000513139 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 SERINC4A6NH21 518 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 ANKRD28O15084 1053 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 TGDSO95455 350 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 TFPIP10646 304 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 LIMS1P48059 325 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 NME5P56597 212 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 HILS1P60008 231 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 PDZK1Q5T2W1 519 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 TSPO2Q5TGU0 170 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 R3HCC1LQ7Z5L2 792 aaKnown RBP12.08□□□□□ -0.48
SPCS3-204ENST00000513139 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 KRTCAP2Q8N6L1 136 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 OR56A1Q8NGH5 318 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 PSMA8Q8TAA3 256 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 JMJD8Q96S16 334 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 CCDC106Q9BWC9 280 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 CHRNA9Q9UGM1 479 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 PCDHB10Q9UN67 800 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 SPEF1Q9Y4P9 236 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 VWFP04275 2813 aa12.08□□□□□ -0.48
SPCS3-204ENST00000513139 A0A0G2JND7 137 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 EIF1BO60739 113 aaKnown RBP12.07□□□□□ -0.48
SPCS3-204ENST00000513139 MAPK1P28482 360 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 LSP1P33241 339 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 SLC1A3P43003 542 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 ASMTP46597 345 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 CCT3P49368 545 aaKnown RBP12.07□□□□□ -0.48
SPCS3-204ENST00000513139 ARFIP2P53365 341 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 GNGT1P63211 74 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 MAD2L1Q13257 205 aaPredicted RBP12.07□□□□□ -0.48
SPCS3-204ENST00000513139 ZNF141Q15928 474 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 SMU1Q2TAY7 513 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 OGFOD2Q6N063 350 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 PEG10Q86TG7 708 aaKnown RBP12.07□□□□□ -0.48
SPCS3-204ENST00000513139 POMGNT2Q8NAT1 580 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 OR4F15Q8NGB8 312 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 UBASH3BQ8TF42 649 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 WDR60Q8WVS4 1066 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 ARL5BQ96KC2 179 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 SDF2Q99470 211 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
SPCS3-204ENST00000513139 MOV10Q9HCE1 1003 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms