RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GSNP06396 782 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 RYKP34925 604 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 MAPK11Q15759 364 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 SYPL1Q16563 259 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 SWI5Q1ZZU3 235 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 C3orf36Q3SXR2 165 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 COX20Q5RI15 118 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 ATG16L1Q676U5 607 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 LRRC74BQ6ZQY2 392 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 CCDC103Q8IW40 242 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 ANKFN1Q8N957 763 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 SLC38A1Q9H2H9 487 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 OSGIN1Q9UJX0 560 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 FKBP7Q9Y680 259 aa11.01□□□□□ -0.65
VEGFA-216ENST00000512683 LOC390937A0A1W2PQ73 354 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 CFAP73A6NFT4 308 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 KLF11O14901 512 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 ERLIN1O75477 346 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 PDE5AO76074 875 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 GPIP06744 558 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 DBIP07108 87 aaKnown RBP11□□□□□ -0.65
VEGFA-216ENST00000512683 CHRM4P08173 479 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 IDO1P14902 403 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 PDLIM4P50479 330 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 MVDP53602 400 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 PDCD4Q53EL6 469 aaKnown RBP11□□□□□ -0.65
VEGFA-216ENST00000512683 GPAT3Q53EU6 434 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 KLHL24Q6TFL4 600 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 CASP12Q6UXS9 341 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 ZNF621Q6ZSS3 439 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 LSRQ86X29 649 aaPredicted RBP11□□□□□ -0.65
VEGFA-216ENST00000512683 ZNF525Q8N782 197 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 MAGEE2Q8TD90 523 aaPredicted RBP11□□□□□ -0.65
VEGFA-216ENST00000512683 CNOT9Q92600 299 aaKnown RBP11□□□□□ -0.65
VEGFA-216ENST00000512683 OR52B2Q96RD2 323 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 SDR39U1Q9NRG7 319 aaPredicted RBP11□□□□□ -0.65
VEGFA-216ENST00000512683 SLC7A10Q9NS82 523 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 TMEM45AQ9NWC5 275 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 NKIRAS1Q9NYS0 192 aa11□□□□□ -0.65
VEGFA-216ENST00000512683 CHD3Q12873 2000 aaKnown RBP10.99□□□□□ -0.65
VEGFA-216ENST00000512683 VWC2LB2RUY7 222 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 B9A039 149 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 SLC22A3O75751 556 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 IGHV4-31P0DP07 118 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 IMPDH2P12268 514 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 IL7RP16871 459 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 HNF1AP20823 631 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 PTNP21246 168 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 RPS4Y1P22090 263 aaKnown RBP10.99□□□□□ -0.65
VEGFA-216ENST00000512683 TACR3P29371 465 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 SNRPD2P62316 118 aaKnown RBP10.99□□□□□ -0.65
VEGFA-216ENST00000512683 MST1LQ2TV78 715 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 TSPO2Q5TGU0 170 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 NXNQ6DKJ4 435 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 UGT2A3Q6UWM9 527 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 B3GLCTQ6Y288 498 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 GLB1L3Q8NCI6 653 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-216ENST00000512683 OR52E4Q8NGH9 312 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 PNPT1Q8TCS8 783 aaKnown RBP10.99□□□□□ -0.65
VEGFA-216ENST00000512683 ZBTB18Q99592 522 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 KATNB1Q9BVA0 655 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 OR11A1Q9GZK7 315 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 CALML5Q9NZT1 146 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 KCNS2Q9ULS6 477 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 NBEAL1Q6ZS30 2694 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 ALPK2Q86TB3 2170 aa10.99□□□□□ -0.65
VEGFA-216ENST00000512683 A0A096LPI6 279 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 AQP7P3A6NL99 342 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 RFXANKO14593 260 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 AP3D1O14617 1153 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 KRT75O95678 551 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 CRYAAP02489 173 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 IL6P05231 212 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 CXCR1P25024 350 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 SERPINF1P36955 418 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 NR4A2P43354 598 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 COPZ1P61923 177 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 SQLEQ14534 574 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 EFNB3Q15768 340 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 AGBL2Q5U5Z8 902 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 TMEM225Q6GV28 225 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 FAM166AQ6J272 317 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 AAED1Q7RTV5 226 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 PEX5LQ8IYB4 626 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 ZIC4Q8N9L1 334 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 OR4F15Q8NGB8 312 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 OR9K2Q8NGE7 335 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 OR9I1Q8NGQ6 314 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 KCNS3Q9BQ31 491 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 PIMREGQ9BSJ6 248 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 C1QTNF6Q9BXI9 259 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 ARMC7Q9H6L4 198 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 THUMPD1Q9NXG2 353 aaKnown RBP10.98□□□□□ -0.65
VEGFA-216ENST00000512683 ZIM2Q9NZV7 527 aa10.98□□□□□ -0.65
VEGFA-216ENST00000512683 CRNNQ9UBG3 495 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms