RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CXXC5Q7LFL8 322 aaKnown RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 GRINAQ7Z429 371 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 NUDCD3Q8IVD9 361 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 FBXL14Q8N1E6 418 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ARFGAP2Q8N6H7 521 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ZNF433Q8N7K0 673 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 OR4A15Q8NGL6 344 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 XAGE5Q8WWM1 108 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PMM1Q92871 262 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 NEUROG1Q92886 237 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ZNF300Q96RE9 604 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 TRAF4Q9BUZ4 470 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 CCDC106Q9BWC9 280 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 DPY30Q9C005 99 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 QRSL1Q9H0R6 528 aaKnown RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 OR51I1Q9H343 314 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PARPBPQ9NWS1 579 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ASB6Q9NWX5 421 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 CHRNA9Q9UGM1 479 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PRSS50Q9UI38 385 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 POU2F3Q9UKI9 436 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 PRDM4Q9UKN5 801 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 MKLN1Q9UL63 735 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 TRAPPC4Q9Y296 219 aa6.33□□□□□ -1.4
USP46-208ENST00000512656 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 NUP214P35658 2090 aaPredicted RBP6.33□□□□□ -1.4
USP46-208ENST00000512656 GOLGA8QA0A0J9YX86 632 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 GOLGA8OA6NCC3 632 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 ZNF716A6NP11 495 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SHISA9B4DS77 424 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 GOLGA8NF8WBI6 632 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 BIRC5O15392 142 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CD5LO43866 347 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SSX4O60224 188 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 RAMP1O60894 148 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CPSF4O95639 269 aaKnown RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 PMS2P2O95744 297 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SERPINE1P05121 402 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 OR12D1P0DN82 309 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 RYKP34925 604 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CHI3L1P36222 383 aaPredicted RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 PGM1P36871 562 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 NUDT6P53370 316 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SLC16A1P53985 500 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 OR2B6P58173 313 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SLC35A1P78382 337 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 TGFBR3Q03167 851 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CHRNB3Q05901 458 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 LRRC74AQ0VAA2 488 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 RAB35Q15286 201 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 PDCD2Q16342 344 aaPredicted RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 GPAT3Q53EU6 434 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 AP1ARQ63HQ0 302 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 TNFAIP8L2Q6P589 184 aaPredicted RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 PODNL1Q6PEZ8 512 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SLC22A25Q6T423 547 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CLEC2AQ6UVW9 174 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CMIPQ8IY22 773 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 LRRC34Q8IZ02 419 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CLECL1Q8IZS7 167 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 TRIML2Q8N7C3 387 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 MAPK1IP1LQ8NDC0 245 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 FAM71CQ8NEG0 241 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 ZNF75CPQ92670 426 aaPredicted RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 TESCQ96BS2 214 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 ZNF524Q96C55 264 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 ROPN1LQ96C74 230 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 DDIT4LQ96D03 193 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 NEURL3Q96EH8 262 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 DHRS9Q9BPW9 319 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 NAA11Q9BSU3 229 aaPredicted RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 SERHL2Q9H4I8 314 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 FKRPQ9H9S5 495 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 EXOSC3Q9NQT5 275 aaKnown RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 YAE1D1Q9NRH1 226 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 CBLN4Q9NTU7 201 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 TAS2R16Q9NYV7 291 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 MALT1Q9UDY8 824 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 MARCOQ9UEW3 520 aaPredicted RBP6.32□□□□□ -1.4
USP46-208ENST00000512656 KCNE5Q9UJ90 142 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 SLC9A8Q9Y2E8 581 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 RAP2CQ9Y3L5 183 aa6.32□□□□□ -1.4
USP46-208ENST00000512656 ALPK2Q86TB3 2170 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 FAM234BA2RU67 622 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 A8MV72 311 aaPredicted RBP6.31□□□□□ -1.4
USP46-208ENST00000512656 ZNF208O43345 1280 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 TYROBPO43914 113 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 RAD51DO75771 328 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 CD8AP01732 235 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 CD40P25942 277 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 ARRB2P32121 409 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 S100A3P33764 101 aa6.31□□□□□ -1.4
USP46-208ENST00000512656 TTKP33981 857 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms