RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 P2RY4P51582 365 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 UBE2NP61088 152 aaKnown RBP16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 C3orf36Q3SXR2 165 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 CFAP157Q5JU67 520 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 KANK2Q63ZY3 851 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 FAHD2BQ6P2I3 314 aaPredicted RBP16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 YIPF5Q969M3 257 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 COQ8BQ96D53 544 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 CCDC126Q96EE4 140 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 FAHD2AQ96GK7 314 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 FMO2Q99518 471 aa16.37■□□□□ 0.21
HMGCS1-206ENST00000511774 A0A0G2JK05 382 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 PRAMEF27A3QJZ7 478 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 OR6C65A6NJZ3 312 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 ERCC1P07992 297 aaPredicted RBP16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 ARAFP10398 606 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 SAGP10523 405 aaPredicted RBP16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 TCN1P20061 433 aaPredicted RBP16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 SOAT1P35610 550 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 GPR6P46095 362 aaPredicted RBP16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 LIMS1P48059 325 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 UGT3A2Q3SY77 523 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 MIDNQ504T8 468 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 FRRS1Q6ZNA5 592 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 C6orf120Q7Z4R8 191 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 MAGEE2Q8TD90 523 aaPredicted RBP16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 ACMSDQ8TDX5 336 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 C1orf50Q9BV19 199 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 MRPL37Q9BZE1 423 aaKnown RBP16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 OXSMQ9NWU1 459 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 PCDHGB4Q9UN71 923 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 SLC35A3Q9Y2D2 325 aa16.36■□□□□ 0.21
HMGCS1-206ENST00000511774 LIPT2A6NK58 231 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 AQP7P3A6NL99 342 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 TMEM229AB2RXF0 380 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 ZNF587BE7ETH6 402 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 ZNF208O43345 1280 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 PLIN3O60664 434 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 C1QCP02747 245 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 ADRA2CP18825 462 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 FKBP2P26885 142 aaKnown RBP16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 TACR3P29371 465 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 CEACAM7Q14002 265 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 LSM12Q3MHD2 195 aaKnown RBP16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 KRT80Q6KB66 452 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 SHISA2Q6UWI4 295 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 TREML4Q6UXN2 200 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 RIMKLAQ8IXN7 391 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 CLECL1Q8IZS7 167 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 FAM169BQ8N8A8 192 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 OR51F2Q8NH61 342 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 IFT81Q8WYA0 676 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 RAB8BQ92930 207 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 MOAP1Q96BY2 351 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 ANKRD27Q96NW4 1050 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 C1QTNF5Q9BXJ0 243 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 TMPRSS13Q9BYE2 586 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 OR51I1Q9H343 314 aa16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 FBXO9Q9UK97 447 aaPredicted RBP16.35■□□□□ 0.21
HMGCS1-206ENST00000511774 PIP5K1BO14986 540 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 CFLARO15519 480 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 NCR1O76036 304 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 PNPP00491 289 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 AK1P00568 194 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 TFP02787 698 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 OR12D1P0DN82 309 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 CBR1P16152 277 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 POLR2HP52434 150 aaKnown RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 SEC24CP53992 1094 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 NAA20P61599 178 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 UBA52P62987 128 aaKnown RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 SCGB2A2Q13296 93 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 SNTB2Q13425 540 aaKnown RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 OR7A5Q15622 319 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 C16orf62Q7Z3J2 963 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 GPAT4Q86UL3 456 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 EPHX4Q8IUS5 362 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 ARFGAP2Q8N6H7 521 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 DDIT4LQ96D03 193 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 ZNF837Q96EG3 531 aaPredicted RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 SLC35G5Q96KT7 338 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 C3orf30Q96M34 536 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 SF3B5Q9BWJ5 86 aaKnown RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 NOX3Q9HBY0 568 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 EXOSC3Q9NQT5 275 aaKnown RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 ZNF275Q9NSD4 429 aaPredicted RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 MYEF2Q9P2K5 600 aaKnown RBP16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 DCDC2Q9UHG0 476 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 WDR45Q9Y484 360 aa16.34■□□□□ 0.21
HMGCS1-206ENST00000511774 KRT33AO76009 404 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 CHRNGP07510 517 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 ALDH3B1P43353 468 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 ETF1P62495 437 aaKnown RBP16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 KCNJ10P78508 379 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 ARF1P84077 181 aaKnown RBP16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 POU3F1Q03052 451 aaPredicted RBP16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 CREB3L2Q70SY1 520 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 C1QL2Q7Z5L3 287 aa16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 ABHD12BQ7Z5M8 362 aaPredicted RBP16.33■□□□□ 0.2
HMGCS1-206ENST00000511774 DDIASQ8IXT1 998 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms