RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CCDC22O60826 627 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 MRPL33O75394 65 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 IGHV1-2P23083 117 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 PCGF2P35227 344 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 CRYBA2P53672 197 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 OTUD3Q5T2D3 398 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 FAM91A1Q658Y4 838 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 TMEM225Q6GV28 225 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 LINC00114Q6XXX2 140 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 HSD17B8Q92506 261 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 TAAR8Q969N4 342 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 TAMM41Q96BW9 452 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 KTI12Q96EK9 354 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 PIK3IP1Q96FE7 263 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 SLC47A1Q96FL8 570 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 USB1Q9BQ65 265 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 PTDSS2Q9BVG9 487 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 TAPBPLQ9BX59 468 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 PARPBPQ9NWS1 579 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 RPS6KB2Q9UBS0 482 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 SLC13A4Q9UKG4 626 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 EDARQ9UNE0 448 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 USP22Q9UPT9 525 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 PLEKHA6Q9Y2H5 1048 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 CADP27708 2225 aa14.26□□□□□ -0.13
PDLIM5-216ENST00000511767 IGKV1D-42A0A075B6H8 117 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 A0A087WUJ7 227 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 A0A0B4J2E0 115 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 A0A1B0GX12 115 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ELOA3DA6NLF2 546 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 FZD7O75084 574 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 PNMTP11086 282 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 COX4I1P13073 169 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 CD247P20963 164 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 RGS8P57771 180 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 VEZF1Q14119 521 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 TAB1Q15750 504 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 NRF1Q16656 503 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ELOA3BQ3SY89 546 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ALG10BQ5I7T1 473 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 INTS11Q5TA45 600 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 BHLHA15Q7RTS1 189 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 TREML1Q86YW5 311 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 RBM45Q8IUH3 476 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 POU5F2Q8N7G0 328 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ZNF433Q8N7K0 673 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ELOA3Q8NG57 546 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 OR9K2Q8NGE7 335 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 OR4D11Q8NGI4 311 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 KISS1RQ969F8 398 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 APH1AQ96BI3 265 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 SLC25A36Q96CQ1 311 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 HS3ST6Q96QI5 342 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ADPRHL2Q9NX46 363 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 ITPR3Q14573 2671 aa14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 TEP1Q99973 2627 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-216ENST00000511767 PDLIM1O00151 329 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 OR2T1O43869 369 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 FMO6PO60774 539 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 VAMP5O95183 116 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 ATE1O95260 518 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 AHSA1O95433 338 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 IGHV3-9P01782 118 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 OPN1SWP03999 348 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 DRD4P21917 467 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 IL32P24001 234 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 DNASE1P24855 282 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 RPS5P46782 204 aaKnown RBP14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 ART1P52961 327 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 CDH12P55289 794 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 FOXG1P55316 489 aaPredicted RBP14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 LTBQ06643 244 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 NPTX1Q15818 432 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 BEX5Q5H9J7 111 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 SPNS3Q6ZMD2 512 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 CREB3L2Q70SY1 520 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 WFDC8Q8IUA0 241 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 EPHX4Q8IUS5 362 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 SLC15A3Q8IY34 581 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 KDM8Q8N371 416 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 OR6T1Q8NGN1 323 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 TMEM45BQ96B21 275 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 MBD6Q96DN6 1003 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 MUS81Q96NY9 551 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 ZNF385AQ96PM9 386 aaKnown RBP14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 MCHR1Q99705 422 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 FOXC2Q99958 501 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 MYLK2Q9H1R3 596 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 TESQ9UGI8 421 aaKnown RBP14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 F8P00451 2351 aa14.24□□□□□ -0.13
PDLIM5-216ENST00000511767 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 GMNCA6NCL1 334 aa14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 M0R3H8 397 aa14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 LYZL6O75951 148 aa14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 LYPD3O95274 346 aa14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 THY1P04216 161 aa14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 COX5AP20674 150 aa14.23□□□□□ -0.13
PDLIM5-216ENST00000511767 GYS2P54840 703 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms