RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TFP02787 698 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CA3P07451 260 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 APRTP07741 180 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 HTR1AP08908 422 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PET100P0DJ07 73 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ETS2P15036 469 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 UCHL3P15374 230 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PAX1P15863 534 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MALP21145 153 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MMP11P24347 488 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ATP5A1P25705 553 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 STOMP27105 288 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RBMS1P29558 406 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 GNRHRP30968 328 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CALCRP30988 508 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 FOXN2P32314 431 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SSTR5P35346 364 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 VHLP40337 213 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PSMD8P48556 350 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SUOXP51687 545 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 UGT2B15P54855 530 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 HERVK_113P63132 956 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RPL19P84098 196 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC6A3Q01959 620 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SRSF6Q13247 344 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 BIKQ13323 160 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CTBP1Q13363 440 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ARHGEF7Q14155 803 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TRIP10Q15642 601 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TNXAQ16473 311 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 POU2AF1Q16633 256 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 VWC2Q2TAL6 325 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PGGHGQ32M88 737 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 POM121L1PQ3SYA9 428 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 GPR33Q49SQ1 333 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ACSBG2Q5FVE4 666 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 GCSAMLQ5JQS6 135 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SIRPB2Q5JXA9 342 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 UBE2UQ5VVX9 321 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RESP18Q5W5W9 173 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 LPCAT4Q643R3 524 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM211Q6ICI0 200 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 OR52W1Q6IF63 320 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ACOT7LQ6ZUV0 252 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RRM2BQ7LG56 351 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 APTXQ7Z2E3 356 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 KLHDC8AQ8IYD2 350 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CMTM8Q8IZV2 173 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SYS1Q8N2H4 156 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ZCCHC9Q8N567 271 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SIRT6Q8N6T7 355 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 AMER3Q8N944 861 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM161BQ8NDZ6 487 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 OR11H1Q8NG94 326 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 OR11H2Q8NH07 326 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MRAPQ8TCY5 172 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC2A12Q8TD20 617 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PHF10Q8WUB8 498 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SFT2D1Q8WV19 159 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TRUB1Q8WWH5 349 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MMABQ96EY8 250 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RNF170Q96K19 258 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ALKBH3Q96Q83 286 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 OR2A14Q96R47 310 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TNFRSF13CQ96RJ3 184 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ERGIC2Q96RQ1 377 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ECSITQ9BQ95 431 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 THAP7Q9BT49 309 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ADI1Q9BV57 179 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MECRQ9BV79 373 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 FTHL17Q9BXU8 183 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC2A11Q9BYW1 496 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TM6SF1Q9BZW5 370 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 NEUROG2Q9H2A3 272 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MIXL1Q9H2W2 232 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 BOLA2Q9H3K6 86 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 FAM83DQ9H4H8 585 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ANKRD19PQ9H560 264 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 EQTNQ9NQ60 294 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC2A9Q9NRM0 540 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MTMR10Q9NXD2 777 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SIDT1Q9NXL6 827 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 BFARQ9NZS9 450 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 FLRT1Q9NZU1 646 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 XPR1Q9UBH6 696 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 HSPB7Q9UBY9 170 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ZDHHC2Q9UIJ5 367 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 NXT1Q9UKK6 140 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF490Q9ULM2 529 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 B9D1Q9UPM9 204 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 FOXJ3Q9UPW0 622 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 MAP3K2Q9Y2U5 619 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CSDC2Q9Y534 153 aaKnown RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 YIPF1Q9Y548 306 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ENTPD2Q9Y5L3 495 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 EMSYQ7Z589 1322 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 LAMB4A4D0S4 1761 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SIPA1L3O60292 1781 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms