RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 INPP5JQ15735 1006 aaPredicted RBP13.55□□□□□ -0.24
PHF3-209ENST00000509330 TMEM44Q2T9K0 475 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 ALG10Q5BKT4 473 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 ZNF440Q8IYI8 595 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 OR13C5Q8NGS8 318 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 LPAR4Q99677 370 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 IER2Q9BTL4 223 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 SRA1Q9HD15 236 aaKnown RBP13.55□□□□□ -0.24
PHF3-209ENST00000509330 MMP25Q9NPA2 562 aa13.55□□□□□ -0.24
PHF3-209ENST00000509330 CCDC59Q9P031 241 aaKnown RBP13.55□□□□□ -0.24
PHF3-209ENST00000509330 SHISA3A0PJX4 238 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 CASKO14936 926 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 ENDOUP21128 410 aaKnown RBP13.54□□□□□ -0.24
PHF3-209ENST00000509330 DCAF7P61962 342 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 QPRTQ15274 297 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 VASNQ6EMK4 673 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 FAM181AQ8N9Y4 354 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 LSM14AQ8ND56 463 aaKnown RBP13.54□□□□□ -0.24
PHF3-209ENST00000509330 C17orf47Q8NEP4 570 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 OR5J2Q8NH18 312 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 KCTD7Q96MP8 289 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 SMURF1Q9HCE7 757 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 MED11Q9P086 117 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 HRH3Q9Y5N1 445 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 AHCTF1Q8WYP5 2266 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 SDK2Q58EX2 2172 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 B4DXG7 233 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 GUSBP08236 651 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
PHF3-209ENST00000509330 NRG3P56975 720 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 ZNF85Q03923 595 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 TPBGQ13641 420 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 OVCH1Q7RTY7 1134 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 NANOGNBQ7Z5D8 188 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 MR1Q95460 341 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 LAT2Q9GZY6 243 aa13.54□□□□□ -0.24
PHF3-209ENST00000509330 PMS2P1A4D2B8 440 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 SAGE2PA6NJ88 616 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ALG1L2C9J202 215 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 H3BSH0 61 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 J3QRE1 110 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 PPM1BO75688 479 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 SLC25A12O75746 678 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 CER1O95813 267 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ANKRD34CP0C6C1 535 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 PNMTP11086 282 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 SLC2A5P22732 501 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 RORCP51449 518 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 RPL18Q07020 188 aaKnown RBP13.53□□□□□ -0.24
PHF3-209ENST00000509330 COL28A1Q2UY09 1125 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 YOD1Q5VVQ6 348 aaPredicted RBP13.53□□□□□ -0.24
PHF3-209ENST00000509330 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ZNF441Q8N8Z8 693 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 WDR77Q9BQA1 342 aaPredicted RBP13.53□□□□□ -0.24
PHF3-209ENST00000509330 A0A1W2PRG6 482 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 GABRPO00591 440 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 GABRA5P31644 462 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 RUNX1T1Q06455 604 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 Q6ZNX1 250 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 NPEPL1Q8NDH3 523 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 HTRA1Q92743 480 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ULBP3Q9BZM4 244 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ZMIZ1Q9ULJ6 1067 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 TVP23AA6NH52 213 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 DCTN6O00399 190 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 SULT1C4O75897 302 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 OR2J2O76002 312 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 GP1BBP13224 206 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 IL11P20809 199 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 PSMB10P40306 273 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ADH7P40394 386 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ZSWIM7Q19AV6 140 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 ZNF385CQ66K41 422 aaPredicted RBP13.53□□□□□ -0.24
PHF3-209ENST00000509330 JAZF1Q86VZ6 243 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
PHF3-209ENST00000509330 TGIF2Q9GZN2 237 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 NRIP3Q9NQ35 241 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 BABAM2Q9NXR7 383 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 KLRF1Q9NZS2 232 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 COMMD3Q9UBI1 195 aa13.53□□□□□ -0.24
PHF3-209ENST00000509330 SPI1P17947 270 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 TNFSF8P32971 234 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 PNLIPRP2P54317 469 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 ARSKQ6UWY0 536 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 DPY19L2P2Q6ZN68 376 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 CPEB2Q7Z5Q1 589 aaKnown RBP13.52□□□□□ -0.24
PHF3-209ENST00000509330 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 DTX3Q8N9I9 347 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 DTWD2Q8NBA8 298 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 OR5M1Q8NGP8 315 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 OR5W2Q8NH69 310 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 NEIL3Q8TAT5 605 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms