RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 WWOXQ9NZC7 414 aa4.46□□□□□ -1.7
CALCOCO2-212ENST00000509014 OR14J1Q9UGF5 321 aa4.46□□□□□ -1.7
CALCOCO2-212ENST00000509014 AMDHD2Q9Y303 409 aa4.46□□□□□ -1.7
CALCOCO2-212ENST00000509014 LYVE1Q9Y5Y7 322 aa4.46□□□□□ -1.7
CALCOCO2-212ENST00000509014 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-212ENST00000509014 NOTCH1P46531 2555 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 LRIT2A6NDA9 550 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SYNDIG1LA6NDD5 238 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 OR10H2O60403 315 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SNX4O95219 450 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CLPSP04118 112 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CRHP06850 196 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 IGFBP5P24593 272 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 FDFT1P37268 417 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CASP3P42574 277 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 NPY2RP49146 381 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 STARP49675 285 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 FUT6P51993 359 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 MTTPP55157 894 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CLDN20P56880 219 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 UBASH3AP57075 661 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 FBXW4P57775 412 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 IGLV3-21P80748 117 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 RPL36AP83881 106 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 VLDLRP98155 873 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SRYQ05066 204 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 FUT7Q11130 342 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 STX4Q12846 297 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 RBBP5Q15291 538 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 PNLIPRP3Q17RR3 467 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 FAM174BQ3ZCQ3 159 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 C18orf63Q68DL7 685 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 DUPD1Q68J44 220 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 TIGD3Q6B0B8 471 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 ADAM5Q6NVV9 412 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 UNQ6126/PRO20091Q6UXV3 157 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CFAP77Q6ZQR2 320 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 ZNF771Q7L3S4 317 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 KLHDC8AQ8IYD2 350 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 TBC1D19Q8N5T2 526 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 RFLNBQ8N5W9 214 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 BBS10Q8TAM1 723 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 RAB3IL1Q8TBN0 382 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SPPL2AQ8TCT8 520 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 EEF1AKMT1Q8WVE0 214 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SLC5A11Q8WWX8 675 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 UCN3Q969E3 161 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 PPWD1Q96BP3 646 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 ELMOD3Q96FG2 381 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 PGM2Q96G03 612 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SENP5Q96HI0 755 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CCDC42Q96M95 316 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 CMTM3Q96MX0 182 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 TSNARE1Q96NA8 513 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 TNFRSF13CQ96RJ3 184 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 ANP32EQ9BTT0 268 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 NAT10Q9H0A0 1025 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SHARPINQ9H0F6 387 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 PELI2Q9HAT8 420 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 PARVBQ9HBI1 364 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 PLSCR4Q9NRQ2 329 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 INTS10Q9NVR2 710 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 KCNG2Q9UJ96 466 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 LIPT1Q9Y234 373 aa4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 MRPS33Q9Y291 106 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 MAGED1Q9Y5V3 778 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-212ENST00000509014 SERINC4A6NH21 518 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 PLOD2O00469 737 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 ERI3O43414 337 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 FGF17O60258 216 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 DOK2O60496 412 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 LMX1BO60663 402 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 CD8AP01732 235 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 C8GP07360 202 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 APRTP07741 180 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 ZSCAN5DPP0CG00 497 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 IGHV4-31P0DP07 118 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 ZNF708P17019 499 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 GABRB1P18505 474 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 SAT1P21673 171 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 TBXA2RP21731 343 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 PTGDSP41222 190 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 MSH2P43246 934 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 LHX2P50458 406 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 CASP9P55211 416 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 CLDN18P56856 261 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 RWDD2BP57060 319 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 SIRPAP78324 504 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 LOXL1Q08397 574 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 MAD2L1Q13257 205 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 SERTAD2Q14140 314 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 EFTUD2Q15029 972 aaKnown RBP eCLIP4.44□□□□□ -1.72e-6■■□□□ 14.3
CALCOCO2-212ENST00000509014 EBPQ15125 230 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 TOMM20Q15388 145 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 PCGF3Q3KNV8 242 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 ADPRMQ3LIE5 342 aa4.44□□□□□ -1.7
CALCOCO2-212ENST00000509014 FAM76BQ5HYJ3 339 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms