RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CEACAM1P13688 526 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 IVDP26440 423 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 MARK3P27448 753 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 OR1D2P34982 312 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 AHRP35869 848 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 HMGCLP35914 325 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 AQP2P41181 271 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 TNFSF10P50591 281 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 NOVA1P51513 510 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SPOCK1Q08629 439 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ARL16Q0P5N6 197 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CEACAM7Q14002 265 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PDK2Q15119 407 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF648Q5T619 568 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CAPN13Q6MZZ7 669 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF836Q6ZNA1 936 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF605Q86T29 641 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SLC30A8Q8IWU4 369 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CMTM4Q8IZR5 234 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 OR5B17Q8NGF7 314 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 RP9Q8TA86 221 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 FEVQ99581 238 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 APOBEC3GQ9HC16 384 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CISHQ9NSE2 258 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SEMA4GQ9NTN9 838 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 HSPB11Q9Y547 144 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ARPC2O15144 300 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LDLRAD4O15165 306 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 IFNA5P01569 189 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 MYOGP15173 224 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 HTR1FP30939 366 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CDH17Q12864 832 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ZIK1Q3SY52 487 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 UBE2UQ5VVX9 321 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 OR4F3Q6IEY1 312 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LHFPL4Q7Z7J7 247 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PRR22Q8IZ63 422 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 LYPD6BQ8NI32 183 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 GLYATL2Q8WU03 294 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SKA2Q8WVK7 121 aaPredicted RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 ST8SIA1Q92185 356 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 NUS1Q96E22 293 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 KIRREL1Q96J84 757 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 SAP30LQ9HAJ7 183 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 PLEKHA1Q9HB21 404 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 CUTCQ9NTM9 273 aa3.6□□□□□ -1.83
NEDD4-209ENST00000508871 UTP11Q9Y3A2 253 aaKnown RBP3.6□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1W2PRD5 423 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SIGLEC16A6NMB1 481 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 EFCAB7A8K855 629 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 PIRO00625 290 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 PHF1O43189 567 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 CEACAM5P06731 702 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 RETP07949 1114 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 OR2T7P0C7T2 308 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SP4Q02446 784 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TGFBR3Q03167 851 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SAMD13Q5VXD3 122 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TXNRD3NBQ6F5E7 133 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ACSM6Q6P461 480 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 LIAT1Q6ZQX7 453 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ABHD13Q7L211 337 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 PIGZQ86VD9 579 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 DHFR2Q86XF0 187 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 LAX1Q8IWV1 398 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 STK40Q8N2I9 435 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SORCS1Q8WY21 1168 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TFAP2BQ92481 460 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 NARS2Q96I59 477 aaKnown RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TSSK2Q96PF2 358 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 TAAR6Q96RI8 345 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 GSKIPQ9P0R6 139 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 FBXL3Q9UKT7 428 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 A0A087X0K7 114 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF816-ZNF321PA0A0X1KG74 233 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ANKDD1BA6NHY2 528 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 F5H5T6 163 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 F8VVB4 439 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 F8VWA3 439 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 CHST10O43529 356 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 MED26O95402 600 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 S100A2P29034 98 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 CRABP2P29373 138 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 MTNR1AP48039 350 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 RASSF2P50749 326 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 C2orf54Q08AI8 447 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 LIN52Q52LA3 116 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SLC44A3Q8N4M1 653 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 KLHDC1Q8N7A1 406 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SLC16A11Q8NCK7 471 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 NANPQ8TBE9 248 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 EDARADDQ8WWZ3 215 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 PRR11Q96HE9 360 aaPredicted RBP3.59□□□□□ -1.83
NEDD4-209ENST00000508871 SORCS2Q96PQ0 1159 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 CALN1Q9BXU9 219 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 KLRF1Q9NZS2 232 aa3.59□□□□□ -1.83
NEDD4-209ENST00000508871 ADAM22Q9P0K1 906 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms