RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 LRRIQ4A6NIV6 560 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 GFYI3L273 518 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 DNALI1O14645 258 aaPredicted RBP4.33□□□□□ -1.72
CHD1-205ENST00000508756 CASQ2O14958 399 aaPredicted RBP4.33□□□□□ -1.72
CHD1-205ENST00000508756 ARPC3O15145 178 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 MSH4O15457 936 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 DNAJB6O75190 326 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 LEPP41159 167 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 GRIA1P42261 906 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 EBI3Q14213 229 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 C1orf146Q5VVC0 180 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 ATL3Q6DD88 541 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 CCDC137Q6PK04 289 aaKnown RBP4.33□□□□□ -1.72
CHD1-205ENST00000508756 ACOT7LQ6ZUV0 252 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 TPRA1Q86W33 373 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 LRRC43Q8N309 656 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 Q8N9W7 124 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 TRMT10AQ8TBZ6 339 aaKnown RBP4.33□□□□□ -1.72
CHD1-205ENST00000508756 BLOC1S5Q8TDH9 187 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 UCN3Q969E3 161 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 TPD52L3Q96J77 140 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 CHRDL1Q9BU40 450 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 NCOR1P1Q9H4R4 102 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 FN3KRPQ9HA64 309 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 MTRF1LQ9UGC7 380 aaKnown RBP4.33□□□□□ -1.72
CHD1-205ENST00000508756 NEUROG3Q9Y4Z2 214 aa4.33□□□□□ -1.72
CHD1-205ENST00000508756 SERTM2A0A1B0GWG4 89 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 BTBD17A6NE02 478 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 NCF1BA6NI72 391 aaPredicted RBP4.32□□□□□ -1.72
CHD1-205ENST00000508756 GJE1A6NN92 205 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 FAM166BA8MTA8 275 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 NCF1CA8MVU1 366 aaPredicted RBP4.32□□□□□ -1.72
CHD1-205ENST00000508756 G3V4G9 280 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 H0Y8G0 127 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 FGF4P08620 206 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 GALP22466 123 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 PPT1P50897 306 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 TGM3Q08188 693 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 FGL1Q08830 312 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 GGTA1PQ4G0N0 100 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 UQCC3Q6UW78 93 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 ZNF75CPQ92670 426 aaPredicted RBP4.32□□□□□ -1.72
CHD1-205ENST00000508756 CFAP53Q96M91 514 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 SPATA16Q9BXB7 569 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 ROPN1BQ9BZX4 212 aaPredicted RBP4.32□□□□□ -1.72
CHD1-205ENST00000508756 FAM192AQ9GZU8 254 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 ZNF223Q9UK11 482 aaPredicted RBP4.32□□□□□ -1.72
CHD1-205ENST00000508756 NOTCH2Q04721 2471 aa4.32□□□□□ -1.72
CHD1-205ENST00000508756 PHLPP2Q6ZVD8 1323 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 OR2AG2A6NM03 316 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 OR52A4PA6NMU1 304 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 PNMTP11086 282 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 ZNF44P15621 663 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 NT5EP21589 574 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 PRDX3P30048 256 aaKnown RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 HPCAL1P37235 193 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 TNNT2P45379 298 aaPredicted RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 PLA2G16P53816 162 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 HSPA2P54652 639 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 PRMT2P55345 433 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 SRSF5Q13243 272 aaKnown RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 PRAMEF20Q5VT98 475 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 KDM7AQ6ZMT4 941 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 CDR2LQ86X02 465 aaPredicted RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 UBE2J2Q8N2K1 259 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 ZNF786Q8N393 782 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 MARCH1Q8TCQ1 289 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 SPRYD4Q8WW59 207 aaPredicted RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 RAPGEF5Q92565 580 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 EMG1Q92979 244 aaKnown RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 NPY6RQ99463 290 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 RHBGQ9H310 441 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 RPRD1BQ9NQG5 326 aaKnown RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 GNG12Q9UBI6 72 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 KIF25Q9UIL4 384 aa4.31□□□□□ -1.72
CHD1-205ENST00000508756 PRPF19Q9UMS4 504 aaKnown RBP4.31□□□□□ -1.72
CHD1-205ENST00000508756 ATP10DQ9P241 1426 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 E7ESA3 106 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 MAGEB4O15481 346 aaPredicted RBP4.3□□□□□ -1.72
CHD1-205ENST00000508756 DFNA5O60443 496 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 MMP1P03956 469 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 PABPC4LP0CB38 370 aaKnown RBP4.3□□□□□ -1.72
CHD1-205ENST00000508756 ANXA8P13928 327 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 LAP3P28838 519 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 RDXP35241 583 aaKnown RBP4.3□□□□□ -1.72
CHD1-205ENST00000508756 SUCLG1P53597 346 aaKnown RBP4.3□□□□□ -1.72
CHD1-205ENST00000508756 SEC61GP60059 68 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 ENPEPQ07075 957 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 GPNMBQ14956 572 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 EXOC3L2Q2M3D2 409 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 BCL7AQ4VC05 210 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 CAVIN4Q5BKX8 364 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 CASC10Q5T4H9 136 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 ANXA8L1Q5VT79 327 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 CLEC2AQ6UVW9 174 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 NANOGNBQ7Z5D8 188 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 ZNF683Q8IZ20 524 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 CCDC148Q8NFR7 591 aa4.3□□□□□ -1.72
CHD1-205ENST00000508756 TCTEX1D2Q8WW35 142 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms