RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CACNG6Q9BXT2 260 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 RMND5AQ9H871 391 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 BARX1Q9HBU1 254 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 B3GALT5Q9Y2C3 310 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 AQP7P3A6NL99 342 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 TMEM229AB2RXF0 380 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 M0R1B8 84 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 KLF11O14901 512 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 UBDO15205 165 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 ANP32DO95626 131 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 GPIP06744 558 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 HOXB9P17482 250 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 CXCR1P25024 350 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 MPGP29372 298 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 IRX1P78414 480 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 DMTNQ08495 405 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 NRF1Q16656 503 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 C6orf10Q5SRN2 563 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 AGAP6Q5VW22 663 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 WBP2NLQ6ICG8 309 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 CLIP4Q8N3C7 705 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 CADM2Q8N3J6 435 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 GTF2H4Q92759 462 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 C3orf49Q96BT1 292 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 ITCHQ96J02 903 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 DHRS9Q9BPW9 319 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 SF3B5Q9BWJ5 86 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 TMBIM4Q9HC24 238 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC17A5Q9NRA2 495 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 CBLN4Q9NTU7 201 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 NKIRAS1Q9NYS0 192 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 UPB1Q9UBR1 384 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 PRDM4Q9UKN5 801 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 AMDHD2Q9Y303 409 aa11.4□□□□□ -0.58
HMGCS1-205ENST00000508319 SVEP1Q4LDE5 3571 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 A0A096LNT2 108 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 A8MVM7 634 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 NPIPB7O75200 414 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 CRLF1O75462 422 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 NUDT7P0C024 238 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 POLR2JP52435 117 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 COPZ1P61923 177 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 TGFBR3Q03167 851 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 LARS2Q15031 903 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 AAED1Q7RTV5 226 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 SERPINA11Q86U17 422 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 GPAT4Q86UL3 456 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 MIER2Q8N344 545 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 MUC15Q8N387 334 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 SPATA9Q9BWV2 254 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 C1QTNF6Q9BXI9 259 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 PAIP1Q9H074 479 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 PIF1Q9H611 641 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 ADPRHL2Q9NX46 363 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 THUMPD1Q9NXG2 353 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 POU2F3Q9UKI9 436 aa11.39□□□□□ -0.59
HMGCS1-205ENST00000508319 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 A0A096LPI6 279 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 A0A0G2JPF8 293 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 FAM234BA2RU67 622 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 HNRNPCL2B2RXH8 293 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 HNRNPCL3B7ZW38 293 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 CD5LO43866 347 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 SSX4O60224 188 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 HNRNPCL1O60812 293 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 HNRNPCL4P0DMR1 293 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 BMP2P12643 396 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 NCF2P19878 526 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 MRPL19P49406 292 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 NUDT6P53370 316 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 LGALS3BPQ08380 585 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 FADDQ13158 208 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 RGNQ15493 299 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 ZSWIM7Q19AV6 140 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 BEND6Q5SZJ8 279 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 C1orf140Q5VVS0 124 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 PRAMEF8Q5VWM4 474 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 PRAMEF7Q5VXH5 474 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 ZNF544Q6NX49 715 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 SLC2A7Q6PXP3 512 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 MSRB3Q8IXL7 192 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 POMGNT2Q8NAT1 580 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 MAL2Q969L2 176 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 BOD1Q96IK1 185 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 ADAD1Q96M93 576 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 MDFIQ99750 246 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 PTDSS2Q9BVG9 487 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 BCL2L10Q9HD36 194 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 A4GALTQ9NPC4 353 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 USH1CQ9Y6N9 552 aa11.38□□□□□ -0.59
HMGCS1-205ENST00000508319 YLPM1P49750 1951 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-205ENST00000508319 RTTNQ86VV8 2226 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms