RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ELANEP08246 267 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CAPGP40121 348 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CD97P48960 835 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 MAPK12P53778 367 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SELENOVP59797 346 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 S100A12P80511 92 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ADORA2A-AS1P86434 159 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SNTB2Q13425 540 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ALKBH1Q13686 389 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 FAM98BQ52LJ0 330 aaKnown RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 RNLSQ5VYX0 342 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 CYB5R2Q6BCY4 276 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 C1orf94Q6P1W5 598 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ACSM6Q6P461 480 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 GPAT4Q86UL3 456 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 MSRB3Q8IXL7 192 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SLC35F3Q8IY50 421 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 LINC00482Q8N8I6 264 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF740Q8NDX6 193 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OR2T12Q8NG77 320 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OR10A6Q8NH74 314 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 R3HDM4Q96D70 268 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 RNF145Q96MT1 663 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 SEPHS2Q99611 448 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 TMEM246Q9BRR3 403 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF717Q9BY31 904 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OR51B5Q9H339 312 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 OR51B6Q9H340 312 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 ACSS1Q9NUB1 689 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-206ENST00000507875 HAO2Q9NYQ3 351 aa6.5□□□□□ -1.37
CLCN3-206ENST00000507875 RALGAPA1Q6GYQ0 2036 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 DCHS1Q96JQ0 3298 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TRBV5-3A0A0A0MS03 114 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 A0A1W2PRX2 142 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TMEM210A6NLX4 147 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 GABRR3A8MPY1 467 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 H6PDO95479 791 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TBX6O95947 436 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 LDLRP01130 860 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CRYGCP07315 174 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CHRM4P08173 479 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 FURINP09958 794 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ICAM2P13598 275 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 PTNP21246 168 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 HIST1H1TP22492 207 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 GATA3P23771 443 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ATP5A1P25705 553 aaKnown RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 FRKP42685 505 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 SSR2P43308 183 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 UBE2G2P60604 165 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 C2orf80Q0P641 193 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 MERTKQ12866 999 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 APOFQ13790 326 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 FAM53BQ14153 422 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 NDUFA5Q16718 116 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CNPY1Q3B7I2 92 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 NADK2Q4G0N4 442 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CST9LP1Q5W188 147 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TCEAL6Q6IPX3 200 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TMEM71Q6P5X7 295 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 WDR88Q6ZMY6 472 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 VN1R4Q7Z5H5 301 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 OR5M1Q8NGP8 315 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ZFP28Q8NHY6 868 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TCEAL3Q969E4 200 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 MOAP1Q96BY2 351 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 PPCDCQ96CD2 204 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TM4SF18Q96CE8 201 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CEP19Q96LK0 163 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TSSK3Q96PN8 268 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 F2RL3Q96RI0 385 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 BDH2Q9BUT1 245 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 DUSP26Q9BV47 211 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 IKZF5Q9H5V7 419 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CDCP1Q9H5V8 836 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 EXO5Q9H790 373 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 PNPLA3Q9NST1 481 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 OLAHQ9NV23 265 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF282Q9UDV7 671 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ZNF639Q9UID6 485 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 V9GYQ6 96 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 MYOCOSA0A1B0GUC4 107 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 MED19A0JLT2 244 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ELOVL7A1L3X0 281 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CGB1A6NKQ9 187 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 C4orf47A7E2U8 309 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 TMX2-CTNND1H3BSU7 103 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CLOCKO15516 846 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CRYZL1O95825 349 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 MT-ND1P03886 318 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 KLK1P06870 262 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ADRB1P08588 477 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 CD3GP09693 182 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 GCSHP23434 173 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 PPP2R1BP30154 601 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 GABRA4P48169 554 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 NKX2-5P52952 324 aaPredicted RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 ARSFP54793 590 aa6.49□□□□□ -1.37
CLCN3-206ENST00000507875 SRSF3P84103 164 aaKnown RBP6.49□□□□□ -1.37
CLCN3-206ENST00000507875 RHAGQ02094 409 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms