RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RAB13P51153 203 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 CLDN2P57739 230 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 TAS2R20P59543 309 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 EEF1A1P68104 462 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 FAM74A1Q5RGS3 127 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM215Q68D42 235 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 MRM1Q6IN84 353 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 ARL14Q8N4G2 192 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 LINC00469Q8N7U9 141 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 OR2T27Q8NH04 317 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 MIB2Q96AX9 1013 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 MRI1Q9BV20 369 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 CCDC86Q9H6F5 360 aaKnown RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 GPR34Q9UPC5 381 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 PCYT1BQ9Y5K3 369 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 V9GY05 133 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 TP53BP1Q12888 1972 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 HOXA2O43364 376 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 GPRIN2O60269 458 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 CALCBP10092 127 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 EDNRAP25101 427 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 MPIP34949 423 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC48A1Q6P1K1 146 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 RAB11FIP2Q7L804 512 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 TMCO2Q7Z6W1 182 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 RANBP3LQ86VV4 465 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF433Q8N7K0 673 aaPredicted RBP15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 OR8K3Q8NH51 312 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 ADAMTS15Q8TE58 950 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 BPIFA2Q96DR5 249 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 SCLYQ96I15 445 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 IGSF21Q96ID5 467 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 FANCFQ9NPI8 374 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 CYB5R1Q9UHQ9 305 aa15.73■□□□□ 0.11
SQSTM1-211ENST00000506690 NUMA1Q14980 2115 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 CENPVL1A0A0U1RR11 272 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 FKTNO75072 461 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 RASGRP1O95267 797 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 APOC1P02654 83 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 GP1BAP07359 652 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 F3P13726 295 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ACHEP22303 614 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 FAUP35544 74 aaKnown RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 HSD17B2P37059 387 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 LTB4RQ15722 352 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 CEBPEQ15744 281 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 TMEM35AQ53FP2 167 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ELP2Q6IA86 826 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 TCEAL8Q8IYN2 117 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC16A11Q8NCK7 471 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 OR5K2Q8NHB8 316 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF296Q8WUU4 475 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF707Q96C28 371 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ICAM5Q9UMF0 924 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 TRAV27A0A087WT01 109 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 TBC1D3EA0A087X179 549 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 TRAV14DV4A0A0A6YYC5 116 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ACOD1A6NK06 481 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 NRG2O14511 850 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 CTNSO60931 367 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 PPP1R3DO95685 299 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 HIST1H1TP22492 207 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ADH7P40394 386 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 RAB33AQ14088 237 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 PARS2Q7L3T8 475 aaKnown RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 OR4C16Q8NGL9 310 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 OR6N1Q8NGY5 312 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 MRGPRX3Q96LB0 322 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF681Q96N22 645 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 CACYBPQ9HB71 228 aaKnown RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 CTSFQ9UBX1 484 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 WDR45Q9Y484 360 aa15.72■□□□□ 0.11
SQSTM1-211ENST00000506690 ARPC4-TTLL3A0A0A6YYG9 625 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 DUXAA6NLW8 204 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 RLN1P04808 185 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 MEOX2P50222 304 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 STX4Q12846 297 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 OR1Q1Q15612 314 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 MICBQ29980 383 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 ZNF528Q3MIS6 628 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 EIPR1Q53HC9 387 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 SPOUT1Q5T280 376 aaKnown RBP15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 UQCC3Q6UW78 93 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 ACOT4Q8N9L9 421 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 RPS4Y2Q8TD47 263 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 STK35Q8TDR2 534 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 CYB5D2Q8WUJ1 264 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 TNFAIP8L1Q8WVP5 186 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 CDS1Q92903 461 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 SLC25A28Q96A46 364 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 ZMYND19Q96E35 227 aaPredicted RBP15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 FERD3LQ96RJ6 166 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 PRDM7Q9NQW5 492 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 GNG8Q9UK08 70 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 MOKQ9UQ07 419 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 PLEKHM1Q9Y4G2 1056 aa15.71■□□□□ 0.11
SQSTM1-211ENST00000506690 TET1Q8NFU7 2136 aa15.71■□□□□ 0.1
SQSTM1-211ENST00000506690 IGKV1-8A0A0C4DH67 115 aa15.7■□□□□ 0.1
SQSTM1-211ENST00000506690 OR6C74A6NCV1 312 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms