RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HOXA6P31267 233 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 BDKRB1P46663 353 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 SP4Q02446 784 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 CD47Q08722 323 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 KCNJ11Q14654 390 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 ATXN7L3Q14CW9 347 aaPredicted RBP4.44□□□□□ -1.7
HERC4-213ENST00000506515 GLYR1Q49A26 553 aaPredicted RBP4.44□□□□□ -1.7
HERC4-213ENST00000506515 MARCH8Q5T0T0 291 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 SLC22A10Q63ZE4 541 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 BAIAP2L2Q6UXY1 529 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 ECHDC2Q86YB7 292 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 C9orf40Q8IXQ3 194 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 METTL13Q8N6R0 699 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 TRUB1Q8WWH5 349 aaKnown RBP4.44□□□□□ -1.7
HERC4-213ENST00000506515 SIGLEC12Q96PQ1 595 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 SLC30A2Q9BRI3 323 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 IKZF5Q9H5V7 419 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 PNO1Q9NRX1 252 aaKnown RBP4.44□□□□□ -1.7
HERC4-213ENST00000506515 CYTH4Q9UIA0 394 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 SMC3Q9UQE7 1217 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 SMAD5-AS1Q9Y6J3 95 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 CLUHO75153 1309 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 FRMPD4Q14CM0 1322 aa4.44□□□□□ -1.7
HERC4-213ENST00000506515 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 FAM220BPB1ANY3 271 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 E9PLD3 99 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 SRSF10O75494 262 aaKnown RBP4.43□□□□□ -1.7
HERC4-213ENST00000506515 ECI2O75521 394 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 TM7SF2O76062 418 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 HBQ1P09105 142 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 ZNF806P0C7X5 589 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 PPIAL4GP0DN37 164 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 ATP6V1C1P21283 382 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 DRD5P21918 477 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 HOXA9P31269 272 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 SOX6P35712 828 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 LIM2P55344 173 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 TPD52L1Q16890 204 aaPredicted RBP4.43□□□□□ -1.7
HERC4-213ENST00000506515 FAM120AOSQ5T036 256 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 LIN9Q5TKA1 542 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 SLC25A24Q6NUK1 477 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 UFSP1Q6NVU6 142 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 Q6ZR54 194 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 NIPA1Q7RTP0 329 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 TMEM17Q86X19 198 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 HSCBQ8IWL3 235 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 OR9A4Q8NGU2 314 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 RAB7BQ96AH8 199 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 TMEM80Q96HE8 168 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 NT5C3AQ9H0P0 336 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 ZNF302Q9NR11 478 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 L3MBTL1Q9Y468 752 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 SPACA6W5XKT8 324 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 GPR179Q6PRD1 2367 aa4.43□□□□□ -1.7
HERC4-213ENST00000506515 LCTP09848 1927 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 MIA3Q5JRA6 1907 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 MTCL1Q9Y4B5 1905 aaKnown RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 MYH9P35579 1960 aaKnown RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 ESYT2A0FGR8 921 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 OR6C65A6NJZ3 312 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 A8MUI8 341 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 RHOBTB1O94844 696 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 OPN1LWP04000 364 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 IGF1P05019 195 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 CD55P08174 381 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 MX1P20591 662 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 ACADVLP49748 655 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 RND3P61587 244 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 ST3GAL3Q11203 375 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 SNTB2Q13425 540 aaKnown RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 DPYSL3Q14195 570 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 SLC36A3Q495N2 470 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 NADK2Q4G0N4 442 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 CEP55Q53EZ4 464 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 N4BP2L1Q5TBK1 243 aaPredicted RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 TWF2Q6IBS0 349 aaKnown RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 GALNT17Q6IS24 598 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 ACSM5Q6NUN0 579 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 PAMR1Q6UXH9 720 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 KIAA1328Q86T90 577 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 LINC00612Q8N6U2 182 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 PNPT1Q8TCS8 783 aaKnown RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 ZPLD1Q8TCW7 415 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 MRAPQ8TCY5 172 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 C8orf33Q9H7E9 229 aaPredicted RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 PLXNA4Q9HCM2 1894 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 Q9UF83 564 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 XPO7Q9UIA9 1087 aaKnown RBP4.42□□□□□ -1.7
HERC4-213ENST00000506515 VSIG4Q9Y279 399 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 UBIAD1Q9Y5Z9 338 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 LOXHD1Q8IVV2 1947 aa4.42□□□□□ -1.7
HERC4-213ENST00000506515 F5P12259 2224 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 IGKV6D-21A0A0A0MT36 114 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 GSAPA4D1B5 854 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 FCN1O00602 326 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 LATO43561 262 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 TRAPPC3O43617 180 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 OR1F1O43749 312 aa4.41□□□□□ -1.7
HERC4-213ENST00000506515 NUDT21O43809 227 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms