RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NOTCH2Q04721 2471 aa14.83□□□□□ -0.04
SNCA-209ENST00000506244 CELSR2Q9HCU4 2923 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 TRAV36DV7A0A075B6V5 113 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 A0A087WUJ7 227 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 TRAPPC13A5PLN9 417 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 CASKO14936 926 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 KLK2P20151 261 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 CCKARP32238 428 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 GSK3BP49841 420 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 CRYBA2P53672 197 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 CYBRD1Q53TN4 286 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 ENTPD8Q5MY95 495 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 CARM1Q86X55 608 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 ZNF100Q8IYN0 542 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 APH1AQ96BI3 265 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 TMEM43Q9BTV4 400 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 PARPBPQ9NWS1 579 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 ZNF226Q9NYT6 803 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 ADAM21Q9UKJ8 722 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 RASD1Q9Y272 281 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 SH3GLB1Q9Y371 365 aa14.82□□□□□ -0.04
SNCA-209ENST00000506244 CPSF4LA6NMK7 179 aaKnown RBP14.81□□□□□ -0.04
SNCA-209ENST00000506244 A6NNC1 897 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 CYSRT1A8MQ03 144 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 CXCR6O00574 342 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 FZD7O75084 574 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 MRPL33O75394 65 aaKnown RBP14.81□□□□□ -0.04
SNCA-209ENST00000506244 GMNNO75496 209 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 AKR7A3O95154 331 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 PSMB1P20618 241 aaKnown RBP14.81□□□□□ -0.04
SNCA-209ENST00000506244 RPS5P46782 204 aaKnown RBP14.81□□□□□ -0.04
SNCA-209ENST00000506244 CDH12P55289 794 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 EGR4Q05215 589 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 DAZAP2Q15038 168 aaPredicted RBP14.81□□□□□ -0.04
SNCA-209ENST00000506244 P2RY6Q15077 328 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 NPTX1Q15818 432 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 FBXW10Q5XX13 1052 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 C16orf89Q6UX73 402 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 Q6ZT83 130 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 CCDC103Q8IW40 242 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 PGAM4Q8N0Y7 254 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 STEAP2Q8NFT2 490 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 OR6S1Q8NH40 331 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 LINC01560Q8TB33 94 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 ADAMTS16Q8TE57 1224 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 MPP4Q96JB8 637 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 USB1Q9BQ65 265 aaKnown RBP14.81□□□□□ -0.04
SNCA-209ENST00000506244 PTDSS2Q9BVG9 487 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 HDHD5Q9BXW7 423 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 ADA2Q9NZK5 511 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 GPR52Q9Y2T5 361 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 CORINQ9Y5Q5 1042 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 MPDZO75970 2070 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 CACNA1DQ01668 2161 aa14.81□□□□□ -0.04
SNCA-209ENST00000506244 IGKV1D-42A0A075B6H8 117 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 ZNF814B7Z6K7 855 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 FTCDNL1E5RQL4 147 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 TPST2O60704 377 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 IL32P24001 234 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 IFNA8P32881 189 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 SELENOWP63302 87 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 MXRA7P84157 204 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 SLC17A1Q14916 467 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 KRT72Q14CN4 511 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 TMEM225Q6GV28 225 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 CASP12Q6UXS9 341 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 STAC2Q6ZMT1 411 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 DEF8Q6ZN54 512 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 GPAT4Q86UL3 456 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 GABRG1Q8N1C3 465 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 TMEM99Q8N816 258 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 ADPRHL1Q8NDY3 354 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 OR9K2Q8NGE7 335 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 TMEM45BQ96B21 275 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 SLC25A36Q96CQ1 311 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 KTI12Q96EK9 354 aaPredicted RBP14.8□□□□□ -0.04
SNCA-209ENST00000506244 TPD52L3Q96J77 140 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 WFDC6Q9BQY6 131 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 PRR14Q9BWN1 585 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 SLC19A3Q9BZV2 496 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 B3GALT5Q9Y2C3 310 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 FLVCR1Q9Y5Y0 555 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 MAST4O15021 2626 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 NAV2Q8IVL1 2488 aa14.8□□□□□ -0.04
SNCA-209ENST00000506244 RAMP1O60894 148 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 OR5F1O95221 314 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 MT-ATP6P00846 226 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 THRBP10828 461 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 TAS2R41P59536 307 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 POU4F3Q15319 338 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 SAMD4BQ5PRF9 694 aaKnown RBP14.79□□□□□ -0.04
SNCA-209ENST00000506244 ABCA12Q86UK0 2595 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 RBM45Q8IUH3 476 aaKnown RBP14.79□□□□□ -0.04
SNCA-209ENST00000506244 UBE2J2Q8N2K1 259 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 OR4D11Q8NGI4 311 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 GEMIN6Q8WXD5 167 aaKnown RBP14.79□□□□□ -0.04
SNCA-209ENST00000506244 KISS1RQ969F8 398 aaPredicted RBP14.79□□□□□ -0.04
SNCA-209ENST00000506244 FAM162AQ96A26 154 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 ZNF775Q96BV0 537 aaPredicted RBP14.79□□□□□ -0.04
SNCA-209ENST00000506244 LURAP1Q96LR2 239 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms