RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RNF165Q6ZSG1 346 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 ELOVL3Q9HB03 270 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 POLE3Q9NRF9 147 aa12.96□□□□□ -0.34
TCOF1-207ENST00000504761 ACOD1A6NK06 481 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 OR2J2O76002 312 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 MPLP40238 635 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 CSNK1A1P48729 337 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 MLLT11Q13015 90 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 CCDC92Q53HC0 331 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 GPR139Q6DWJ6 353 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 CCBE1Q6UXH8 406 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 RFT1Q96AA3 541 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 RNF167Q9H6Y7 350 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 SCN2AQ99250 2005 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 HTR3EA5X5Y0 456 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 MAGEB4O15481 346 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 LSSP48449 732 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 MRPL19P49406 292 aaKnown RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 CSRP3P50461 194 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 HCCSP53701 268 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 SNU13P55769 128 aaKnown RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 FOXL2P58012 376 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 BCL2L15Q5TBC7 163 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 OR4C15Q8NGM1 316 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 TSSK2Q96PF2 358 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 NUDT9Q9BW91 350 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 PCED1AQ9H1Q7 454 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 TMEFF2Q9UIK5 374 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 SYT7O43581 403 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 ICAM2P13598 275 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 VAMP1P23763 118 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 ZIC1Q15915 447 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 MPEG1Q2M385 716 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 KIRREL2Q6UWL6 708 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 TRMT10AQ8TBZ6 339 aaKnown RBP12.95□□□□□ -0.34
TCOF1-207ENST00000504761 NOX1Q9Y5S8 564 aa12.95□□□□□ -0.34
TCOF1-207ENST00000504761 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 TRAV36DV7A0A075B6V5 113 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 PRAMEF25A6NGN4 478 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 A6NIZ1 184 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 AKR7A3O95154 331 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 LCATP04180 440 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 EPHA8P29322 1005 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ALDH3B2P48448 385 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 RAP1BP61224 184 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 RAP1AP62834 184 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF620Q6ZNG0 422 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 GDPGP1Q6ZNW5 385 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 CPEB2Q7Z5Q1 589 aaKnown RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 LINC00346Q8IVM7 164 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ITFG2Q969R8 447 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 EDEM2Q9BV94 578 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 TTYH1Q9H313 450 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 OR51B6Q9H340 312 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 PCDHGB6Q9Y5F9 930 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 IGKV1-8A0A0C4DH67 115 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 GJE1A6NN92 205 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF701M0R085 212 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZNF593O00488 134 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 DNAJB6O75190 326 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 BIDP55957 195 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 C1orf140Q5VVS0 124 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 BBS1Q8NFJ9 593 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 VN1R1Q9GZP7 353 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 SLC6A5Q9Y345 797 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 RALGAPA2Q2PPJ7 1873 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 CDHR4A6H8M9 788 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 CSO75390 466 aaKnown RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 FRKP42685 505 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 CNIH2Q6PI25 160 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 OR2L13Q8N349 312 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 GPR148Q8TDV2 347 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 GHSRQ92847 366 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 RASD1Q9Y272 281 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 LRRC37A2A6NM11 1700 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 NBASA2RRP1 2371 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 A0A1W2PNR3 127 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 SERTM1A2A2V5 107 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ZAR1LA6NP61 321 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 A8MVM7 634 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 M0R082 166 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 RBMXL2O75526 392 aaKnown RBP12.94□□□□□ -0.34
TCOF1-207ENST00000504761 ATP1B1P05026 303 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 FASLGP48023 281 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 FAHD1Q6P587 224 aa12.94□□□□□ -0.34
TCOF1-207ENST00000504761 DHRS13Q6UX07 377 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms