RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 H3F3AP84243 136 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 FAM83EQ2M2I3 478 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 GLIPR1L2Q4G1C9 344 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 TECRLQ5HYJ1 363 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 R3HCC1LQ7Z5L2 792 aaKnown RBP10.62□□□□□ -0.71
LSM6-204ENST00000504181 OR52E2Q8NGJ4 325 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 MAGEE2Q8TD90 523 aaPredicted RBP10.62□□□□□ -0.71
LSM6-204ENST00000504181 CDS1Q92903 461 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 TRIM44Q96DX7 344 aaPredicted RBP10.62□□□□□ -0.71
LSM6-204ENST00000504181 TIMD4Q96H15 378 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 MS4A4EQ96PG1 132 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 BTBD2Q9BX70 525 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 ACPTQ9BZG2 426 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 CTPS2Q9NRF8 586 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 SLC6A13Q9NSD5 602 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 CHRNA9Q9UGM1 479 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 HDGFL3Q9Y3E1 203 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 NOX1Q9Y5S8 564 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 SPIN1Q9Y657 262 aaPredicted RBP10.62□□□□□ -0.71
LSM6-204ENST00000504181 CACNG2Q9Y698 323 aa10.62□□□□□ -0.71
LSM6-204ENST00000504181 TRAPPC2LH3BP13 241 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 MANBAO00462 879 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 TRAF3IP2O43734 574 aaPredicted RBP10.61□□□□□ -0.71
LSM6-204ENST00000504181 EIF4E2O60573 245 aaKnown RBP10.61□□□□□ -0.71
LSM6-204ENST00000504181 MPIG6BO95866 241 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 IFI6P09912 130 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 BCKDHAP12694 445 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 HSD3B1P14060 373 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZNF12P17014 697 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 HSD3B2P26439 372 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 SSTR1P30872 391 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 CRYBB2P43320 205 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZNF763Q0D2J5 394 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 DOC2BQ14184 412 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 DEFB112Q30KQ8 113 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 MDP1Q86V88 176 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZBED8Q8IZ13 594 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZIC4Q8N9L1 334 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 RAB1CQ92928 201 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZNF317Q96PQ6 595 aaPredicted RBP10.61□□□□□ -0.71
LSM6-204ENST00000504181 LYSTQ99698 3801 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ACER3Q9NUN7 267 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 TAS2R7Q9NYW3 318 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZNF225Q9UK10 706 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 ZNF346Q9UL40 294 aaKnown RBP10.61□□□□□ -0.71
LSM6-204ENST00000504181 DTNAQ9Y4J8 743 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 INSIG2Q9Y5U4 225 aa10.61□□□□□ -0.71
LSM6-204ENST00000504181 SACSQ9NZJ4 4579 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 TRAV40A0A0B4J280 105 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 H0YL77 283 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 DHHO43323 396 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 OTCP00480 354 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 CCNA2P20248 432 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 GLRXP35754 106 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 ARR3P36575 388 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 GSTM5P46439 218 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 CAPZA2P47755 286 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 SELENOPP49908 381 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 TEKQ02763 1124 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 SKP2Q13309 424 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 NKPD1Q17RQ9 610 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 PAQR6Q6TCH4 344 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 USP51Q70EK9 711 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 CTAGE3PQ8IX95 158 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 IL17RDQ8NFM7 739 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 OR9K2Q8NGE7 335 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 TMEM234Q8WY98 164 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 NAA11Q9BSU3 229 aaPredicted RBP10.6□□□□□ -0.71
LSM6-204ENST00000504181 CCDC106Q9BWC9 280 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 HOXD1Q9GZZ0 328 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 VPS11Q9H270 941 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 FN3KRPQ9HA64 309 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 TMEM181Q9P2C4 612 aa10.6□□□□□ -0.71
LSM6-204ENST00000504181 C17orf100A8MU93 164 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 PDPK1O15530 556 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
LSM6-204ENST00000504181 PLATP00750 562 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 IGHMP01871 453 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 IMPDH2P12268 514 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 APOBEC1P41238 236 aaKnown RBP10.59□□□□□ -0.71
LSM6-204ENST00000504181 HTR6P50406 440 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 ATP12AP54707 1039 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 CDH13P55290 713 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 MMEL1Q495T6 779 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 DCST2Q5T1A1 773 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 PDZK1Q5T2W1 519 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 GRTP1Q5TC63 336 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 GKAP1Q5VSY0 366 aaPredicted RBP10.59□□□□□ -0.71
LSM6-204ENST00000504181 TMEM154Q6P9G4 183 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 BHLHE22Q8NFJ8 381 aaPredicted RBP10.59□□□□□ -0.71
LSM6-204ENST00000504181 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 CIDECQ96AQ7 238 aaPredicted RBP10.59□□□□□ -0.71
LSM6-204ENST00000504181 SLC47A1Q96FL8 570 aa10.59□□□□□ -0.71
LSM6-204ENST00000504181 SIRT3Q9NTG7 399 aaPredicted RBP10.59□□□□□ -0.71
LSM6-204ENST00000504181 CCDC189A1A4V9 331 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 FAM159BA6NKW6 160 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms