RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	SERPINB7	O75635	380 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	LYZL6	O75951	148 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	KRT33A	O76009	404 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	PGM3	O95394	542 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	AHSA1	O95433	338 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	ETS2	P15036	469 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	PSMB1	P20618	241 aa	Known RBP	9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	FPR1	P21462	350 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	OR3A2	P47893	321 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	MAP2K6	P52564	334 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	ARFIP2	P53365	341 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	RGS8	P57771	180 aa	Predicted RBP	9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	MAPRE2	Q15555	327 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	OR7A5	Q15622	319 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	OTUD3	Q5T2D3	398 aa	Predicted RBP	9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	BHLHA15	Q7RTS1	189 aa	Predicted RBP	9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	SERPINA11	Q86U17	422 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	GPAT4	Q86UL3	456 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	ADGRG3	Q86Y34	549 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	FUNDC1	Q8IVP5	155 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	C11orf65	Q8NCR3	313 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	SLC26A7	Q8TE54	656 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	STON2	Q8WXE9	905 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	S100PBP	Q96BU1	408 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	ZNF524	Q96C55	264 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	MUCL1	Q96DR8	90 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	CCL19	Q99731	98 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	POTEKP	Q9BYX7	375 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	SLC25A37	Q9NYZ2	338 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	VAPA	Q9P0L0	249 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	UPB1	Q9UBR1	384 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	SLC9A8	Q9Y2E8	581 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	DSCAM	O60469	2012 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	CSMD2	Q7Z408	3487 aa		9.46	□□□□□ -0.9
CDK11A-222	ENST00000498810	SPG11	Q96JI7	2443 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	HRNR	Q86YZ3	2850 aa	Predicted RBP	9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	FAM221A	A4D161	298 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810		A8MVM7	634 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	CLOCK	O15516	846 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	IGHV3-9	P01782	118 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	KLK2	P20151	261 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	MTPN	P58546	118 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	BNIP2	Q12982	314 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	ITGAD	Q13349	1161 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	CEACAM7	Q14002	265 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	P2RY6	Q15077	328 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	TSC22D1	Q15714	1073 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	SFRP5	Q5T4F7	317 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	CDPF1	Q6NVV7	123 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810		Q6ZT83	130 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	RANBP3L	Q86VV4	465 aa	Predicted RBP	9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	ARMC8	Q8IUR7	673 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	CLIP4	Q8N3C7	705 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	HIPK4	Q8NE63	616 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	PLPPR2	Q96GM1	343 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	ALPK1	Q96QP1	1244 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	FOXC2	Q99958	501 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	CPPED1	Q9BRF8	314 aa	Predicted RBP	9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	OR10A4	Q9H209	315 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	ESRP2	Q9H6T0	727 aa	Known RBP	9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	BCL2L10	Q9HD36	194 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	MED4	Q9NPJ6	270 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	SLAMF8	Q9P0V8	285 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	PRSS50	Q9UI38	385 aa		9.45	□□□□□ -0.9
CDK11A-222	ENST00000498810	ZC3H12D	A2A288	527 aa	Known RBP	9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	DEFB108A	A8MXU0	73 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	SMPD2	O60906	423 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	RAD51D	O75771	328 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	AKR7A3	O95154	331 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	ATE1	O95260	518 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	PRG2	P13727	222 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	GGT1	P19440	569 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	ADSL	P30566	484 aa	Predicted RBP	9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	PRKAR1B	P31321	381 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	HOXC5	Q00444	222 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	GUCY1A3	Q02108	690 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	MAPK11	Q15759	364 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	DEFB113	Q30KQ7	82 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	TRMT5	Q32P41	509 aa	Known RBP	9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	INTS11	Q5TA45	600 aa	Known RBP	9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	C1orf140	Q5VVS0	124 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	METTL21C	Q5VZV1	264 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	AP1AR	Q63HQ0	302 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	TMEM225	Q6GV28	225 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	PAQR6	Q6TCH4	344 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	KLHL24	Q6TFL4	600 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	ZNF704	Q6ZNC4	412 aa	Predicted RBP	9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	P3H2	Q8IVL5	708 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	CCDC103	Q8IW40	242 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	SLC30A8	Q8IWU4	369 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	MSRB3	Q8IXL7	192 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	GABRG1	Q8N1C3	465 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	OR52E4	Q8NGH9	312 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	HSD17B8	Q92506	261 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	SLC25A36	Q96CQ1	311 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	CGREF1	Q99674	301 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	TMEM38A	Q9H6F2	299 aa		9.44	□□□□□ -0.9
CDK11A-222	ENST00000498810	TMEM27	Q9HBJ8	222 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms