RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 PABPC4LP0CB38 370 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 APEHP13798 732 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 SDC1P18827 310 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 CCNA2P20248 432 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ATP6V1C1P21283 382 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 IGHV1-2P23083 117 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ECHS1P30084 290 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 SLC7A1P30825 629 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 GSTM5P46439 218 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 FABP6P51161 128 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 P2RX1P51575 399 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 FOXG1P55316 489 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ARPC4P59998 168 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 RASGEF1BQ0VAM2 473 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ITGADQ13349 1161 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 TP53BP2Q13625 1128 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 RAB35Q15286 201 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 RNPS1Q15287 305 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 CARTPTQ16568 116 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 SPDYE7PQ495Y7 208 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 RFTN2Q52LD8 501 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 CFAP157Q5JU67 520 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 C9orf135Q5VTT2 229 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 LIPMQ5VYY2 423 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 NXNQ6DKJ4 435 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 VHLLQ6RSH7 139 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 SLC22A25Q6T423 547 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 B3GLCTQ6Y288 498 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 HMGN2P46Q86SG4 172 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 DTX2Q86UW9 622 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 DDIASQ8IXT1 998 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF100Q8IYN0 542 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 NKAIN3Q8N8D7 197 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 OR2T11Q8NH01 316 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 FAM110BQ8TC76 370 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ADAMTS15Q8TE58 950 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ZFP90Q8TF47 636 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 CPNE4Q96A23 557 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 MRPL24Q96A35 216 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF524Q96C55 264 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 MUCL1Q96DR8 90 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 FAM120BQ96EK7 910 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 L3HYPDHQ96EM0 354 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 RADILQ96JH8 1075 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ADAD1Q96M93 576 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 MOGAT1Q96PD6 335 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 MS4A4EQ96PG1 132 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 OR5B2Q96R09 309 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 PSD2Q9BQI7 771 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 HDHD5Q9BXW7 423 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 POTEKPQ9BYX7 375 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 TRIM2Q9C040 744 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 QRSL1Q9H0R6 528 aaKnown RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 OR10A4Q9H209 315 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 MMADHCQ9H3L0 296 aaPredicted RBP4.84□□□□□ -1.63
SPTA1-209ENST00000498708 PIF1Q9H611 641 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 REEP4Q9H6H4 257 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 TIGARQ9NQ88 270 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 UBQLN4Q9NRR5 601 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 TAS2R7Q9NYW3 318 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 NPAP1Q9NZP6 1156 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 EMCNQ9ULC0 261 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 ATP23Q9Y6H3 246 aa4.84□□□□□ -1.63
SPTA1-209ENST00000498708 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.64
SPTA1-209ENST00000498708 PLCE1Q9P212 2302 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 A0A1W2PQD3 144 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 SLC28A1O00337 649 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 CASQ2O14958 399 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 AZIN1O14977 448 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 SMAD9O15198 467 aaKnown RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 CFLARO15519 480 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 RGS14O43566 566 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 AHCYL1O43865 530 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 SHOX2O60902 331 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 GLRA3O75311 464 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 H6PDO95479 791 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 STAMBPO95630 424 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 C6orf47O95873 294 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 PLATP00750 562 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 TFPIP10646 304 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 UROSP10746 265 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 GGT1P19440 569 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 TTKP33981 857 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 SOAT1P35610 550 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 MAP3K8P41279 467 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 EIF1P41567 113 aaKnown RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 OR3A2P47893 321 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ARFIP2P53365 341 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 MRPL28Q13084 256 aaKnown RBP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 KIAA0040Q15053 153 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 P2RY6Q15077 328 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 QPRTQ15274 297 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 GPR68Q15743 365 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 TIGD2Q4W5G0 525 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 DCST2Q5T1A1 773 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.83□□□□□ -1.64
SPTA1-209ENST00000498708 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 C11orf71Q6IPW1 123 aa4.83□□□□□ -1.64
SPTA1-209ENST00000498708 ZYG11AQ6WRX3 759 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms