RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 ENPP5Q9UJA9 477 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 MPDZO75970 2070 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 RIIAD1A6NNX1 92 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 RAD1O60671 282 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 NOL3O60936 208 aaKnown RBP23.62■■□□□ 1.37
HOXB3-212ENST00000498678 RAB36O95755 333 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 HTR3AP46098 478 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 SSR4P51571 173 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 ITGADQ13349 1161 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 ARHGAP11AQ6P4F7 1023 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 ARSKQ6UWY0 536 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 ASB15Q8WXK1 588 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 B3GNT4Q9C0J1 378 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 IER3IP1Q9Y5U9 82 aa23.62■■□□□ 1.37
HOXB3-212ENST00000498678 TRAV36DV7A0A075B6V5 113 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 IRGMA1A4Y4 181 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 TRIM64BA6NI03 449 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 BLOC1S5-TXNDC5H3BN57 136 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 NPIPB7O75200 414 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 APOL3O95236 402 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 RPL4P36578 427 aaKnown RBP23.61■■□□□ 1.37
HOXB3-212ENST00000498678 DLX5P56178 289 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 IL10RAQ13651 578 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 C16orf87Q6PH81 154 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 MARCH9Q86YJ5 346 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 PCSK5Q92824 1860 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 LOC101059948A0A1B0GTJ6 334 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 SLC25A12O75746 678 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 BGLAPP02818 100 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 TGFBR2P37173 567 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 LIPAP38571 399 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 AQP2P41181 271 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 CHAF1BQ13112 559 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 ZNF367Q7RTV3 350 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 ERI1Q8IV48 349 aaKnown RBP23.61■■□□□ 1.37
HOXB3-212ENST00000498678 GID4Q8IVV7 300 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 GPX7Q96SL4 187 aaPredicted RBP23.61■■□□□ 1.37
HOXB3-212ENST00000498678 FKRPQ9H9S5 495 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 CPNE5Q9HCH3 593 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 NRIP3Q9NQ35 241 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 ZNF229Q9UJW7 825 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 ERGIC3Q9Y282 383 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 ADAM18Q9Y3Q7 739 aa23.61■■□□□ 1.37
HOXB3-212ENST00000498678 PRR23D1E9PI22 279 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-212ENST00000498678 PRR23D2P0DMB1 279 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-212ENST00000498678 DOC2BQ14184 412 aa23.6■■□□□ 1.37
HOXB3-212ENST00000498678 CRMP1Q14194 572 aa23.6■■□□□ 1.37
HOXB3-212ENST00000498678 INPP5JQ15735 1006 aaPredicted RBP23.6■■□□□ 1.37
HOXB3-212ENST00000498678 NIPAL3Q6P499 406 aa23.6■■□□□ 1.37
HOXB3-212ENST00000498678 SLC37A3Q8NCC5 494 aa23.6■■□□□ 1.37
HOXB3-212ENST00000498678 PTDSS2Q9BVG9 487 aa23.6■■□□□ 1.37
HOXB3-212ENST00000498678 LSM2Q9Y333 95 aaKnown RBP23.6■■□□□ 1.37
HOXB3-212ENST00000498678 A8MVM7 634 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 TSPAN19P0C672 248 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 HIST1H1CP16403 213 aaKnown RBP23.59■■□□□ 1.37
HOXB3-212ENST00000498678 ZNF3P17036 446 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 NR4A1P22736 598 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 UQCRC1P31930 480 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 ARPC4P59998 168 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 SNTA1Q13424 505 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 MED22Q15528 200 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 TMEM81Q6P7N7 255 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 PAQR6Q6TCH4 344 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 MEPCEQ7L2J0 689 aaKnown RBP23.59■■□□□ 1.37
HOXB3-212ENST00000498678 NANOGP1Q8N7R0 232 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 LRRC75AQ8NAA5 344 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 GPN2Q9H9Y4 310 aaPredicted RBP23.59■■□□□ 1.37
HOXB3-212ENST00000498678 VDAC3Q9Y277 283 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 STMND1H3BQB6 276 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 ETV2O00321 342 aaPredicted RBP23.59■■□□□ 1.37
HOXB3-212ENST00000498678 ARPC3O15145 178 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 CD36P16671 472 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 ETV1P50549 477 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 CTF1Q16619 201 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 ANKDD1AQ495B1 522 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 SHFQ7M4L6 423 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 CYB561A3Q8NBI2 242 aa23.59■■□□□ 1.37
HOXB3-212ENST00000498678 EXOGQ9Y2C4 368 aaKnown RBP23.59■■□□□ 1.37
HOXB3-212ENST00000498678 MRPS18BQ9Y676 258 aaKnown RBP23.59■■□□□ 1.37
HOXB3-212ENST00000498678 IFNGP01579 166 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 DBPQ10586 325 aaPredicted RBP23.58■■□□□ 1.37
HOXB3-212ENST00000498678 ARMCX4Q5H9R4 360 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 P2RY8Q86VZ1 359 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 OR52E2Q8NGJ4 325 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 STK35Q8TDR2 534 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 DNAJA3Q96EY1 480 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 FRMD6Q96NE9 622 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 SECISBP2Q96T21 854 aaKnown RBP23.58■■□□□ 1.37
HOXB3-212ENST00000498678 KATNB1Q9BVA0 655 aa23.58■■□□□ 1.37
HOXB3-212ENST00000498678 GABARAPO95166 117 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 APOBEC1P41238 236 aaKnown RBP23.58■■□□□ 1.36
HOXB3-212ENST00000498678 ERVK-25P63136 954 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 PRAMEF20Q5VT98 475 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 C1orf140Q5VVS0 124 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 H3F3CQ6NXT2 135 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 DND1Q8IYX4 353 aaKnown RBP23.58■■□□□ 1.36
HOXB3-212ENST00000498678 TMEM156Q8N614 296 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 WDSUB1Q8N9V3 476 aa23.58■■□□□ 1.36
HOXB3-212ENST00000498678 PROKR2Q8NFJ6 384 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms