RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 UBQLN4Q9NRR5 601 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC22A11Q9NSA0 550 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 TBCCD1Q9NVR7 557 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 FBXO34Q9NWN3 711 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 SELENONQ9NZV5 590 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 RHCGQ9UBD6 479 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 RPS6KB2Q9UBS0 482 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 CTSFQ9UBX1 484 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 TESQ9UGI8 421 aaKnown RBP4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 ITGB1BP2Q9UKP3 347 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 BLOC1S6Q9UL45 172 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 PADI1Q9ULC6 663 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 SLC35A3Q9Y2D2 325 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 LOXL2Q9Y4K0 774 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 GMPPBQ9Y5P6 360 aa4.84□□□□□ -1.63
HMGXB4-208ENST00000498325 TLN1Q9Y490 2541 aaKnown RBP4.84□□□□□ -1.64
HMGXB4-208ENST00000498325 KNL1Q8NG31 2342 aa4.84□□□□□ -1.64
HMGXB4-208ENST00000498325 RP1P56715 2156 aa4.84□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A087WXM4 84 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CCDC187A0A096LP49 1063 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NPIPA5A0A0B4J1W7 369 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TRBV4-1A0A0J9YWV2 114 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TRAPPC13A5PLN9 417 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CDHR4A6H8M9 788 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 SERINC4A6NH21 518 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 SAGE2PA6NJ88 616 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NPIPA7E9PJI5 369 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 GTPBP1O00178 669 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PEX12O00623 359 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 FFAR1O14842 300 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TO15178 435 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 FRS3O43559 492 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 MPZL2O60487 215 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 MITFO75030 526 aaPredicted RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ZFAND5O76080 213 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CLPTM1O96005 669 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CSTAP01040 98 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 GASTP01350 101 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 IGKV1D-16P01601 117 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 JMJD7P0C870 316 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NPIPA8P0DM63 369 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 OSMP13725 252 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NAGAP17050 411 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TBXA2RP21731 343 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CBLP22681 906 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 GNLYP22749 145 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 RANBP1P43487 201 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NR0B1P51843 470 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CRISP1P54107 249 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CDC42P60953 191 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 COPZ1P61923 177 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 CSNK2BP67870 215 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TUBA4AP68366 448 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 RPP38P78345 283 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PLCXD2Q0VAA5 305 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 FOXD4Q12950 439 aaPredicted RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 EFR3AQ14156 821 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 FGFBP1Q14512 234 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 EBPQ15125 230 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 OR1Q1Q15612 314 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NPTX1Q15818 432 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 MAPK14Q16539 360 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ISXQ2M1V0 245 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 KCTD21Q4G0X4 260 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 C6orf141Q5SZD1 244 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PDZK1Q5T2W1 519 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF691Q5VV52 312 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 C1orf94Q6P1W5 598 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PODNL1Q6PEZ8 512 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF613Q6PF04 617 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PAPD4Q6PIY7 484 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 NPSR1Q6W5P4 371 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 HSDL2Q6YN16 418 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF730Q6ZMV8 503 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 Q6ZRM9 215 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 SHISA6Q6ZSJ9 500 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 LANCL3Q6ZV70 420 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 GDF7Q7Z4P5 450 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 HMGN2P46Q86SG4 172 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 RNF113BQ8IZP6 322 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC34A3Q8N130 599 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PARP8Q8N3A8 854 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF321PQ8N8H1 164 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 AQP11Q8NBQ7 271 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TSPAN14Q8NG11 270 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 OR4K5Q8NGD3 323 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 OR9Q2Q8NGE9 314 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 OR8K3Q8NH51 312 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 PIGXQ8TBF5 258 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC7A13Q8TCU3 470 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ADAMTS16Q8TE57 1224 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ACOT11Q8WXI4 607 aaPredicted RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 HDAC2Q92769 488 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 ADIPOR1Q96A54 375 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC41A3Q96GZ6 507 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 MPP4Q96JB8 637 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 GAL3ST4Q96RP7 486 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 WFDC6Q9BQY6 131 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 DDA1Q9BW61 102 aa4.83□□□□□ -1.64
HMGXB4-208ENST00000498325 TEX12Q9BXU0 123 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms