RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ABHD4Q8TB40 342 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ZPLD1Q8TCW7 415 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF501Q96CX3 271 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-220ENST00000496711 AGAP4Q96P64 663 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NEDD4LQ96PU5 975 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 DDOQ99489 341 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 LAT2Q9GZY6 243 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 C12orf10Q9HB07 376 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NANSQ9NR45 359 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 NPAP1Q9NZP6 1156 aa11.91□□□□□ -0.5
GARNL3-220ENST00000496711 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 TEX13CA0A0J9YWL9 993 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 LINC00854A0A1B0GVQ3 168 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 OR6C68A6NDL8 312 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 HLA-DQB1P01920 261 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 MYF5P13349 255 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 APEX1P27695 318 aaKnown RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 SHC1P29353 583 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 ACVR1BP36896 505 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 CXCL12P48061 93 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 GBX2P52951 348 aaPredicted RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 HCCSP53701 268 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 DAB2P98082 770 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF117Q03924 483 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 PLCXD2Q0VAA5 305 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 IL18Q14116 193 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 CDK5R1Q15078 307 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 C1orf189Q5VU69 101 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 TRIQKQ629K1 86 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 CEACAM19Q7Z692 300 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 PXKQ7Z7A4 578 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 GHDCQ8N2G8 530 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 MS4A15Q8N5U1 240 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 KCTD12Q96CX2 325 aaKnown RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 SMIM19Q96E16 107 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 PELI1Q96FA3 418 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 MRPL48Q96GC5 212 aaKnown RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 MOGAT1Q96PD6 335 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 DEPDC7Q96QD5 511 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 DPYSL5Q9BPU6 564 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 NRSN2Q9GZP1 204 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 WWTR1Q9GZV5 400 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 PPIL3Q9H2H8 161 aaKnown RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 ZNF768Q9H5H4 540 aaKnown RBP11.9□□□□□ -0.5
GARNL3-220ENST00000496711 PPP1R3EQ9H7J1 279 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 FGF21Q9NSA1 209 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 MALT1Q9UDY8 824 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 SEC16AO15027 2179 aa11.9□□□□□ -0.5
GARNL3-220ENST00000496711 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 A0A1W2PRG6 482 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 BLOC1S5-TXNDC5H3BN57 136 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 TO15178 435 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 OGG1O15527 345 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SELENOFO60613 162 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 TSPAN2O60636 221 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SERPINI2O75830 405 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 GLCEO94923 617 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SERPINA3P01011 423 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 CD14P08571 375 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ASAH2BP0C7U1 165 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SLC2A2P11168 524 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 APEHP13798 732 aaKnown RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 TACR3P29371 465 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 UQCRC1P31930 480 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 AQP2P41181 271 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 GDI2P50395 445 aaKnown RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 NR0B1P51843 470 aaKnown RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 EGR4Q05215 589 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ALG10Q5BKT4 473 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SFXN4Q6P4A7 337 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 LEG1Q6P5S2 330 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SLC29A4Q7RTT9 530 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 PRSS58Q8IYP2 241 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 UBQLNLQ8IYU4 475 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 Q8N402 240 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 LSM14AQ8ND56 463 aaKnown RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 OR6K6Q8NGW6 343 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 ZNRF4Q8WWF5 429 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 GHSRQ92847 366 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 CCDC74AQ96AQ1 378 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 Q96M85 177 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 NUDT22Q9BRQ3 303 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 TTYH2Q9BSA4 534 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 NDEL1Q9GZM8 345 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 VN1R1Q9GZP7 353 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 C11orf54Q9H0W9 315 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-220ENST00000496711 MKL2Q9ULH7 1088 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 CDC14CA4D256 554 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 OR6C76A6NM76 312 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 FAM25AB3EWG3 89 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 FAM25CB3EWG5 89 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 FAM25GB3EWG6 89 aa11.89□□□□□ -0.51
GARNL3-220ENST00000496711 IMPA2O14732 288 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms