RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FBXW10Q5XX13 1052 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 AMIGO2Q86SJ2 522 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 ZGRF1Q86YA3 2104 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 ZNF845Q96IR2 970 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-222ENST00000496567 NAA11Q9BSU3 229 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-222ENST00000496567 FKRPQ9H9S5 495 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 NTN4Q9HB63 628 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 NANSQ9NR45 359 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 C20orf141Q9NUB4 165 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 RALYQ9UKM9 306 aaKnown RBP19.5■□□□□ 0.71
C9orf3-222ENST00000496567 CORINQ9Y5Q5 1042 aa19.5■□□□□ 0.71
C9orf3-222ENST00000496567 ENPP1P22413 925 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ACVR2AP27037 513 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 IST1P53990 364 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 NUP107P57740 925 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 LSM11P83369 360 aaKnown RBP eCLIP19.49■□□□□ 0.71
C9orf3-222ENST00000496567 MAMDC2Q7Z304 686 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ADGRE4PQ86SQ3 457 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 DOLPP1Q86YN1 238 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 NRBF2Q96F24 287 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 UCN2Q96RP3 112 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 PKP2Q99959 881 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ASPNQ9BXN1 380 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 SRXN1Q9BYN0 137 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 CALHM2Q9HA72 323 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ZNF229Q9UJW7 825 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ZNF175Q9Y473 711 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 CHD6Q8TD26 2715 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 FZD7O75084 574 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 AGFG1P52594 562 aaKnown RBP19.49■□□□□ 0.71
C9orf3-222ENST00000496567 RIPK1Q13546 671 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 PON3Q15166 354 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ZNF239Q16600 458 aaKnown RBP19.49■□□□□ 0.71
C9orf3-222ENST00000496567 ACSF3Q4G176 576 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-222ENST00000496567 HMBOX1Q6NT76 420 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 PPP4R4Q6NUP7 873 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 PAQR6Q6TCH4 344 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 OR5K1Q8NHB7 308 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 GIPC3Q8TF64 312 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 MOGAT1Q96PD6 335 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 TRIB1Q96RU8 372 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 PRRG4Q9BZD6 226 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 SEMA6AQ9H2E6 1030 aa19.49■□□□□ 0.71
C9orf3-222ENST00000496567 C6orf203Q9P0P8 240 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-222ENST00000496567 CFAP46Q8IYW2 2715 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 ARRDC5A6NEK1 342 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 OR7A10O76100 309 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 BAG2O95816 211 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 HIST1H2ABP04908 130 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 FUT1P19526 365 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 GRPRP30550 384 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 LTBQ06643 244 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 MRPL49Q13405 166 aaKnown RBP19.48■□□□□ 0.71
C9orf3-222ENST00000496567 IGFBP7Q16270 282 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 C1orf185Q5T7R7 199 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 NSUN5P2Q63ZY6 315 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 SHQ1Q6PI26 577 aaKnown RBP19.48■□□□□ 0.71
C9orf3-222ENST00000496567 TMPRSS11FQ6ZWK6 438 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 HIST3H2AQ7L7L0 130 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 PQLC1Q8N2U9 271 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 LIPHQ8WWY8 451 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 HIST1H2ACQ93077 130 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 TINAGQ9UJW2 476 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 OSGIN2Q9Y236 505 aa19.48■□□□□ 0.71
C9orf3-222ENST00000496567 CD8B2A6NJW9 211 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 SLC22A20A6NK97 555 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 LRRN3E7EW58 273 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 ATP6V1G2O95670 118 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 SAGP10523 405 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-222ENST00000496567 FCGR2AP12318 317 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 CBLP22681 906 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 OMPP47874 163 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 H3F3AP84243 136 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 RCN1Q15293 331 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 C1orf94Q6P1W5 598 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 SLC46A3Q7Z3Q1 461 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 ZER1Q7Z7L7 766 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 TMEM179BQ7Z7N9 219 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 HIPK1Q86Z02 1210 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 ZDHHC13Q8IUH4 622 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 SVOPLQ8N434 492 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 SCAIQ8N9R8 606 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 OR10G2Q8NGC3 310 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 FAM46AQ96IP4 442 aaKnown RBP19.47■□□□□ 0.71
C9orf3-222ENST00000496567 DCLRE1BQ9H816 532 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 MRPL39Q9NYK5 338 aaKnown RBP19.47■□□□□ 0.71
C9orf3-222ENST00000496567 PDP1Q9P0J1 537 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-222ENST00000496567 CLCF1Q9UBD9 225 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 B3GALT5Q9Y2C3 310 aa19.47■□□□□ 0.71
C9orf3-222ENST00000496567 TRGV8A0A0C4DH27 118 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 EFCAB9A8MZ26 197 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 AKR7A3O95154 331 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 STSP08842 583 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 ASAH2BP0C7U1 165 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 ZNF23P17027 643 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 MAKP20794 623 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 SLC9A3P48764 834 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 LAPTM4AQ15012 233 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 OTUD3Q5T2D3 398 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-222ENST00000496567 GTF2IRD2BQ6EKJ0 949 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms