RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 H3BQF6 201 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 H3BUI4 141 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF195O14628 629 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 MRPL33O75394 65 aaKnown RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 SEC14L2O76054 403 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ESRRBO95718 433 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 NUDT14O95848 222 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ANXA2P07355 339 aaKnown RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 NR2F1P10589 423 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 HPGDP15428 266 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 FOXG1P55316 489 aaPredicted RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 SELENBP1Q13228 472 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 OR4D1Q15615 310 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ARMC8Q8IUR7 673 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 MISPQ8IVT2 679 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 VSTM4Q8IW00 320 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 GSPT2Q8IYD1 628 aaKnown RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 CDK20Q8IZL9 346 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 FAM9CQ8IZT9 166 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 NAT8LQ8N9F0 302 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 NUP37Q8NFH4 326 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 OR7G2Q8NG99 324 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 B4GALNT2Q8NHY0 566 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 TRPC4APQ8TEL6 797 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 NRG4Q8WWG1 115 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 POP5Q969H6 163 aaKnown RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ARL5BQ96KC2 179 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZNF48Q96MX3 618 aaPredicted RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 KCNJ15Q99712 375 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 MRPL1Q9BYD6 325 aaKnown RBP8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 RABEP2Q9H5N1 569 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 NUDT4Q9NZJ9 180 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 OPN4Q9UHM6 478 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 ICAM5Q9UMF0 924 aa8.24□□□□□ -1.09
SMARCAL1-213ENST00000496037 M0R233 179 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 KLF11O14901 512 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 UGDHO60701 494 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 OXSR1O95747 527 aaPredicted RBP8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 NGFP01138 241 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 LPLP06858 475 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 QDPRP09417 244 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 LINGO3P0C6S8 592 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 KITP10721 976 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 COL8A2P25067 703 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 THBS4P35443 961 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 ARL1P40616 181 aaPredicted RBP8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 MTNR1AP48039 350 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 SUMO3P55854 103 aaPredicted RBP8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 ATP6V0D1P61421 351 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 NAAAQ02083 359 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 LSAMPQ13449 338 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 CASP12Q6UXS9 341 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 Q6ZS46 218 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 OR52E4Q8NGH9 312 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 WDR20Q8TBZ3 569 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 TSPEARQ8WU66 669 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 COG8Q96MW5 612 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC30A2Q9BRI3 323 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 NAT9Q9BTE0 207 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 VIPAS39Q9H9C1 493 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 PCNX3Q9H6A9 2034 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 DNAH9Q9NYC9 4486 aa8.23□□□□□ -1.09
SMARCAL1-213ENST00000496037 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 IGKV3D-15A0A087WSY6 115 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 C5orf63A6NC05 138 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 SUPT3HB4E1H0 165 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 CCDC188H7C350 402 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 PDLIM1O00151 329 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 SCDO00767 359 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 GPR171O14626 319 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 SUPT3HO75486 399 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 KRT14P02533 472 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 HPXP02790 462 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 AMY2AP04746 511 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 CSF1P09603 554 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 CD1DP15813 335 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 SELEP16581 610 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 AMY2BP19961 511 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 PAX7P23759 505 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 ATP4BP51164 291 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 POU3F1Q03052 451 aaPredicted RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 SLC29A2Q14542 456 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 GLE1Q53GS7 698 aaKnown RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 BEND6Q5SZJ8 279 aaPredicted RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 OTUD3Q5T2D3 398 aaPredicted RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 ABLIM2Q6H8Q1 611 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 USP51Q70EK9 711 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 COMMD6Q7Z4G1 85 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 ZC3HC1Q86WB0 502 aaKnown RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 ADGRG3Q86Y34 549 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 BCL6BQ8N143 479 aaPredicted RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 UBTD2Q8WUN7 234 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 MAIP1Q8WWC4 291 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 EXOSC8Q96B26 276 aaKnown RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 MRGPRX4Q96LA9 322 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 OR5B2Q96R09 309 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 MS4A7Q9GZW8 240 aaPredicted RBP8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 PRDM13Q9H4Q3 707 aa8.22□□□□□ -1.09
SMARCAL1-213ENST00000496037 NECAP2Q9NVZ3 263 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms