RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 LMO4P61968 165 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 HBA1P69905 142 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 KCNJ10P78508 379 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 OCLNQ16625 522 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 CCDC153Q494R4 210 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 SPDYE7PQ495Y7 208 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 ELFN2Q5R3F8 820 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 OTUD3Q5T2D3 398 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-209ENST00000495677 LIPMQ5VYY2 423 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 C6orf120Q7Z4R8 191 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 OR51F2Q8NH61 342 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 ANP32BQ92688 251 aaKnown RBP11.59□□□□□ -0.55
COL1A1-209ENST00000495677 DNAJA3Q96EY1 480 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 PRPF18Q99633 342 aaKnown RBP11.59□□□□□ -0.55
COL1A1-209ENST00000495677 LINC00470Q9BZP3 86 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 SERHL2Q9H4I8 314 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 DYNLRB1Q9NP97 96 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 G6PC2Q9NQR9 355 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 TMED7Q9Y3B3 224 aa11.59□□□□□ -0.55
COL1A1-209ENST00000495677 IGHV2OR16-5A0A0B4J2B6 119 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 TMEM72A0PK05 275 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 SH3PXD2BA1X283 911 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 AQP7P3A6NL99 342 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 TMEM229AB2RXF0 380 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 NR5A2O00482 541 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 SYNGR3O43761 229 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 GLRA3O75311 464 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 KRT33AO76009 404 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 LGI1O95970 557 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 CHEK2O96017 543 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 PROCP04070 461 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 GPIP06744 558 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 ADRA2AP08913 450 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 HKR1P10072 659 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 MAPK1P28482 360 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 RYKP34925 604 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 IDH2P48735 452 aaKnown RBP11.58□□□□□ -0.56
COL1A1-209ENST00000495677 MRPS11P82912 194 aaKnown RBP11.58□□□□□ -0.56
COL1A1-209ENST00000495677 IL1RL1Q01638 556 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 PLAURQ03405 335 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 GALNTL6Q49A17 601 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 REP15Q6BDI9 236 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 TYW3Q6IPR3 259 aaKnown RBP11.58□□□□□ -0.56
COL1A1-209ENST00000495677 RIMKLAQ8IXN7 391 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 CCDC36Q8IYA8 594 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 CDK20Q8IZL9 346 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 ARFGAP2Q8N6H7 521 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 TMEM99Q8N816 258 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 ZDHHC22Q8N966 263 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 MZB1Q8WU39 189 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 RDH5Q92781 318 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 ZG16BQ96DA0 208 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 SEC61A2Q9H9S3 476 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 SLC52A3Q9NQ40 469 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-209ENST00000495677 CMAHPQ9Y471 501 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 WDR45Q9Y484 360 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 PCDHGB1Q9Y5G3 927 aa11.58□□□□□ -0.56
COL1A1-209ENST00000495677 ZC3H12DA2A288 527 aaKnown RBP11.57□□□□□ -0.56
COL1A1-209ENST00000495677 LIPT2A6NK58 231 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 AVPP01185 164 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 SAGP10523 405 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-209ENST00000495677 PRPS1L1P21108 318 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 COL8A2P25067 703 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 ECHS1P30084 290 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 ARR3P36575 388 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 P2RY4P51582 365 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 MYBPC1Q00872 1141 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 TUSC1Q2TAM9 212 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 UGT3A2Q3SY77 523 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 KANK2Q63ZY3 851 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 TMEM225Q6GV28 225 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 FAHD2BQ6P2I3 314 aaPredicted RBP11.57□□□□□ -0.56
COL1A1-209ENST00000495677 TREML4Q6UXN2 200 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 CREB3L2Q70SY1 520 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 LINGO2Q7L985 606 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 C1QL2Q7Z5L3 287 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 CARM1Q86X55 608 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 CMIPQ8IY22 773 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 OR5AK3PQ8NH89 298 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 MRPL24Q96A35 216 aaKnown RBP11.57□□□□□ -0.56
COL1A1-209ENST00000495677 FAHD2AQ96GK7 314 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 PPP3R2Q96LZ3 170 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 ESM1Q9NQ30 184 aa11.57□□□□□ -0.56
COL1A1-209ENST00000495677 CFLARO15519 480 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 PLIN3O60664 434 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-209ENST00000495677 AKR7A3O95154 331 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 BCL10O95999 233 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 GSNP06396 782 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 CCNA2P20248 432 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 TACR3P29371 465 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 CASQ1P31415 396 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 SELENOPP49908 381 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 RPS26P62854 115 aaKnown RBP11.56□□□□□ -0.56
COL1A1-209ENST00000495677 CEACAM7Q14002 265 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 DAG1Q14118 895 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 PTGR1Q14914 329 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 GSTA3Q16772 222 aa11.56□□□□□ -0.56
COL1A1-209ENST00000495677 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms