RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LTBQ06643 244 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 RNPS1Q15287 305 aaKnown RBP17.31■□□□□ 0.36
HDAC4-212ENST00000495497 ABLIM2Q6H8Q1 611 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 NUFIP2Q7Z417 695 aaKnown RBP17.31■□□□□ 0.36
HDAC4-212ENST00000495497 MED12LQ86YW9 2145 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 SLC43A2Q8N370 569 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 CCDC124Q96CT7 223 aaKnown RBP17.31■□□□□ 0.36
HDAC4-212ENST00000495497 NAA11Q9BSU3 229 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-212ENST00000495497 C12orf49Q9H741 205 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 JKAMPQ9P055 326 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 SEC14L4Q9UDX3 406 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 EMC9Q9Y3B6 208 aa17.31■□□□□ 0.36
HDAC4-212ENST00000495497 LRRN3E7EW58 273 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 KPNA4O00629 521 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 FFAR1O14842 300 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 DNPH1O43598 174 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 TRIM25Q14258 630 aaKnown RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 DNAL1Q4LDG9 190 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 OTUD3Q5T2D3 398 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 SP5Q6BEB4 398 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 TTC33Q6PID6 262 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 MFSD8Q8NHS3 518 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 TMEM255BQ8WV15 326 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 PYURFQ96I23 114 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 PRRC1Q96M27 445 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 TMEM43Q9BTV4 400 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 POLR2J2Q9GZM3 115 aaKnown RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 POLR2J3Q9H1A7 115 aaKnown RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 NPDC1Q9NQX5 325 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-212ENST00000495497 GLRX2Q9NS18 164 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 ACTR3BQ9P1U1 418 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 KLHL9Q9P2J3 617 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 PROCRQ9UNN8 238 aa17.3■□□□□ 0.36
HDAC4-212ENST00000495497 UTP20O75691 2785 aaKnown RBP17.29■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF716A6NP11 495 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 hCG_2039718K7EN88 272 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 EIF1BO60739 113 aaKnown RBP17.29■□□□□ 0.36
HDAC4-212ENST00000495497 BGLAPP02818 100 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 YES1P07947 543 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 GRPRP30550 384 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 ASCL1P50553 236 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 P2RY4P51582 365 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 VLDLRP98155 873 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 SNTB1Q13884 538 aaKnown RBP17.29■□□□□ 0.36
HDAC4-212ENST00000495497 TMEM201Q5SNT2 666 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 FAM69AQ5T7M9 428 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 PAQR6Q6TCH4 344 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.29■□□□□ 0.36
HDAC4-212ENST00000495497 DHFR2Q86XF0 187 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 C10orf53Q8N6V4 93 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF610Q8N9Z0 462 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 OR6K3Q8NGY3 331 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 PIGXQ8TBF5 258 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 C7orf34Q96L11 122 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 MOGAT1Q96PD6 335 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 CADM1Q9BY67 442 aaKnown RBP17.29■□□□□ 0.36
HDAC4-212ENST00000495497 PIGMQ9H3S5 423 aa17.29■□□□□ 0.36
HDAC4-212ENST00000495497 NBPF19A0A087WUL8 3843 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 TCRBV5S2A0A599 114 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 AQP7P3A6NL99 342 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 GSC2O15499 205 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 DNAJC8O75937 253 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-212ENST00000495497 DIRAS1O95057 198 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 SEMG1P04279 462 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 EDNRAP25101 427 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 UQCRC1P31930 480 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 UGT2B15P54855 530 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 EEF1A1P5Q5VTE0 462 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 PGM2L1Q6PCE3 622 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF474Q6S9Z5 364 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-212ENST00000495497 C5orf46Q6UWT4 87 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 KDM8Q8N371 416 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 PFN4Q8NHR9 129 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 MPP4Q96JB8 637 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 EPYCQ99645 322 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF426Q9BUY5 554 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 FNDC11Q9BVV2 318 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 RBM24Q9BX46 236 aaKnown RBP17.28■□□□□ 0.36
HDAC4-212ENST00000495497 BCO1Q9HAY6 547 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 ENPP4Q9Y6X5 453 aa17.28■□□□□ 0.36
HDAC4-212ENST00000495497 ICE1Q9Y2F5 2266 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 USP9YO00507 2555 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-212ENST00000495497 A8MXE2 369 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 M0R082 166 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 OR2T1O43869 369 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 PIP5K1CO60331 668 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 PRSS23O95084 383 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 CH25HO95992 272 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 CD8BP10966 210 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 GTF2E2P29084 291 aaKnown RBP17.27■□□□□ 0.36
HDAC4-212ENST00000495497 NTF4P34130 210 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 LSM11P83369 360 aaKnown RBP eCLIP17.27■□□□□ 0.36
HDAC4-212ENST00000495497 ST3GAL3Q11203 375 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 PDK3Q15120 406 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 LCN8Q6JVE9 175 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 GPAT4Q86UL3 456 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF417Q8TAU3 575 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 ZNF587Q96SQ5 575 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-212ENST00000495497 SEPHS2Q99611 448 aa17.27■□□□□ 0.36
HDAC4-212ENST00000495497 MUC13Q9H3R2 512 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms