RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	EFNA2	O43921	213 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	PIP5K1C	O60331	668 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	VAMP5	O95183	116 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	SYNGR4	O95473	234 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	CH25H	O95992	272 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	GAST	P01350	101 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	BGLAP	P02818	100 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	OSM	P13725	252 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	FUT1	P19526	365 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	GPR4	P46093	362 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	DIO1	P49895	249 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	LHX2	P50458	406 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	LAPTM4A	Q15012	233 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	OR7A5	Q15622	319 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	SGCB	Q16585	318 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	LPCAT4	Q643R3	524 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF324B	Q6AW86	544 aa	Predicted RBP	12.18	□□□□□ -0.46
APTX-231	ENST00000494973	PAQR6	Q6TCH4	344 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	PRICKLE2	Q7Z3G6	844 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	GGN	Q86UU5	652 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	HS3ST5	Q8IZT8	346 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	OR5J2	Q8NH18	312 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	FANK1	Q8TC84	345 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	OSTF1	Q92882	214 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	GTPBP3	Q969Y2	492 aa	Known RBP	12.18	□□□□□ -0.46
APTX-231	ENST00000494973	NPAS1	Q99742	590 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	PTDSS2	Q9BVG9	487 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	PRDM14	Q9GZV8	571 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	COQ10B	Q9H8M1	238 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	C20orf141	Q9NUB4	165 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	LUZP4	Q9P127	313 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	MCTS1	Q9ULC4	181 aa	Known RBP	12.18	□□□□□ -0.46
APTX-231	ENST00000494973	BAIAP2	Q9UQB8	552 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	HIF3A	Q9Y2N7	669 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	CDH10	Q9Y6N8	788 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	MPDZ	O75970	2070 aa		12.18	□□□□□ -0.46
APTX-231	ENST00000494973	FREM3	P0C091	2139 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	TTLL8	A6PVC2	850 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	FTCDNL1	E5RQL4	147 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	SOCS2	O14508	198 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	NDUFB2	O95178	105 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	HOXD4	P09016	255 aa	Predicted RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	ASAH2B	P0C7U1	165 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	EDN3	P14138	238 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	GABRA1	P14867	456 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	IL11	P20809	199 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	PRKACG	P22612	351 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	EIF1AX	P47813	144 aa	Known RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	CLDN18	P56856	261 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	CARD18	P57730	90 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	OR2B6	P58173	313 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	RPS4X	P62701	263 aa	Known RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	PMS2P3	Q13401	168 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF239	Q16600	458 aa	Known RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	LRRC36	Q1X8D7	754 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	ZBED5	Q49AG3	693 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	SMARCD3	Q6STE5	483 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF620	Q6ZNG0	422 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	H1FNT	Q75WM6	255 aa	Predicted RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	SLC46A3	Q7Z3Q1	461 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	HDDC2	Q7Z4H3	204 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	UBQLNL	Q8IYU4	475 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	CISD2	Q8N5K1	135 aa	Known RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	TEX47	Q8TBZ9	253 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	TAAR8	Q969N4	342 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	SLC25A36	Q96CQ1	311 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	ARL5B	Q96KC2	179 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	TIMP4	Q99727	224 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	BARD1	Q99728	777 aa	Known RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	SLX1A	Q9BQ83	275 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	TACO1	Q9BSH4	297 aa	Known RBP	12.17	□□□□□ -0.46
APTX-231	ENST00000494973	GABARAPL3	Q9BY60	117 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	CHST11	Q9NPF2	352 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	RASD1	Q9Y272	281 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF175	Q9Y473	711 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	LIPG	Q9Y5X9	500 aa		12.17	□□□□□ -0.46
APTX-231	ENST00000494973	LOC400499	M0QZD8	3231 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	USP24	Q9UPU5	2620 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973		A0A0J9YW62	118 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973		A0A1W2PNR3	127 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973		A0A1W2PNV4	684 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	AQP7P3	A6NL99	342 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	FIGNL2	A6NMB9	653 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	AHRR	A9YTQ3	701 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973		H3BN98	237 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	TNFSF11	O14788	317 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	AKAP8	O43823	692 aa	Known RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	WDR1	O75083	606 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	IMPDH2	P12268	514 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	POU2F1	P14859	743 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	ZNF26	P17031	533 aa	Predicted RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	MAK	P20794	623 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	ENPP1	P22413	925 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	GRPR	P30550	384 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	SLC6A6	P31641	620 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	PTGS2	P35354	604 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	DAP	P51397	102 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	RPS6KA3	P51812	740 aa		12.16	□□□□□ -0.46
APTX-231	ENST00000494973	AGFG1	P52594	562 aa	Known RBP	12.16	□□□□□ -0.46
APTX-231	ENST00000494973	FOXK1	P85037	733 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms