RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PCDHB14Q9Y5E9 798 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 IGHV4-30-2A0A087WSY4 118 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 CIB4A0PJX0 185 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 AQP7P3A6NL99 342 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 UBDO15205 165 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 EIF1BO60739 113 aaKnown RBP10.2□□□□□ -0.78
VTI1A-208ENST00000494728 NPIPB7O75200 414 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 ANXA11P50995 505 aaKnown RBP10.2□□□□□ -0.78
VTI1A-208ENST00000494728 CRISP3P54108 245 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 TXNL4AP83876 142 aaKnown RBP10.2□□□□□ -0.78
VTI1A-208ENST00000494728 EGR4Q05215 589 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 GSTA3Q16772 222 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 HIKESHIQ53FT3 197 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 C6orf10Q5SRN2 563 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 ATG16L1Q676U5 607 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 EPGNQ6UW88 154 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 MSANTD1Q6ZTZ1 278 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 CROCCP2Q86T23 111 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 P2RY8Q86VZ1 359 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 FUNDC1Q8IVP5 155 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 TMEM45BQ96B21 275 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 ALKBH3Q96Q83 286 aaPredicted RBP10.2□□□□□ -0.78
VTI1A-208ENST00000494728 EBF4Q9BQW3 602 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 PTDSS2Q9BVG9 487 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 CACNG6Q9BXT2 260 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 REG4Q9BYZ8 158 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 IKZF5Q9H5V7 419 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 SLC17A5Q9NRA2 495 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 ADPRHL2Q9NX46 363 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 USH1CQ9Y6N9 552 aa10.2□□□□□ -0.78
VTI1A-208ENST00000494728 FAM234BA2RU67 622 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 FTCDNL1E5RQL4 147 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 ATP6V1G2-DDX39BF2Z307 99 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 SLCO1B7G3V0H7 640 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 KLF11O14901 512 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 ANP32DO95626 131 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 CXCR1P25024 350 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 FKBP2P26885 142 aaKnown RBP10.19□□□□□ -0.78
VTI1A-208ENST00000494728 HTR2AP28223 471 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 TTKP33981 857 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 SELENOPP49908 381 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 GNA13Q14344 377 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 RGNQ15493 299 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 WBP2NLQ6ICG8 309 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 SLC22A25Q6T423 547 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 TMEM108Q6UXF1 575 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 GPAT4Q86UL3 456 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 MIER2Q8N344 545 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 TRMT61AQ96FX7 289 aaKnown RBP10.19□□□□□ -0.78
VTI1A-208ENST00000494728 ITCHQ96J02 903 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 GRIP2Q9C0E4 1043 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 NELFAQ9H3P2 528 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 SLC52A3Q9NQ40 469 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 NKIRAS1Q9NYS0 192 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 DCTN4Q9UJW0 460 aa10.19□□□□□ -0.78
VTI1A-208ENST00000494728 TRBV5-3A0A0A0MS03 114 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 SSX4O60224 188 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 GPRIN2O60269 458 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 LY6HO94772 140 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 LGI1O95970 557 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 GPIP06744 558 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 BMP2P12643 396 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 CDH2P19022 906 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-208ENST00000494728 PTAFRP25105 342 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 TUBA1BP68363 451 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 TUBA4AP68366 448 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 DMTNQ08495 405 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 ETFDHQ16134 617 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 GLIPR1L2Q4G1C9 344 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 PAGE3Q5JUK9 113 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 C1orf140Q5VVS0 124 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 TUBA1AQ71U36 451 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 MYPOPQ86VE0 399 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-208ENST00000494728 EPHX4Q8IUS5 362 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 ZNF440Q8IYI8 595 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 KDM8Q8N371 416 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 MUC15Q8N387 334 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 ZNF525Q8N782 197 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 PMM1Q92871 262 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 DHRS9Q9BPW9 319 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 WFDC6Q9BQY6 131 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 NAA11Q9BSU3 229 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-208ENST00000494728 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 SPATA9Q9BWV2 254 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 ALG2Q9H553 416 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 SEC61A2Q9H9S3 476 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 A4GALTQ9NPC4 353 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 CALML5Q9NZT1 146 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 B3GAT1Q9P2W7 334 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 UPB1Q9UBR1 384 aa10.18□□□□□ -0.78
VTI1A-208ENST00000494728 IGKV1D-42A0A075B6H8 117 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 A0A0G2JPF8 293 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 A8MVM7 634 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 HNRNPCL2B2RXH8 293 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 HNRNPCL3B7ZW38 293 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 CLIC1O00299 241 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 TPST1O60507 370 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 HNRNPCL1O60812 293 aaKnown RBP10.17□□□□□ -0.78
VTI1A-208ENST00000494728 FZD7O75084 574 aa10.17□□□□□ -0.78
VTI1A-208ENST00000494728 CRLF1O75462 422 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms