RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PROCRQ9UNN8 238 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 SNX13Q9Y5W8 968 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 INTS1Q8N201 2190 aaKnown RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 TRAV36DV7A0A075B6V5 113 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 IGKV3D-15A0A087WSY6 115 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF716A6NP11 495 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF724A8MTY0 619 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 OR2T1O43869 369 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 AKR7A3O95154 331 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 OR5F1O95221 314 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 IGFBP2P18065 325 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 PTNP21246 168 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 UQCRC1P31930 480 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 P2RY4P51582 365 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 TAS2R41P59536 307 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 LTBQ06643 244 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 OTUD3Q5T2D3 398 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF474Q6S9Z5 364 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 C5orf46Q6UWT4 87 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 GDF7Q7Z4P5 450 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 ARHGAP24Q8N264 748 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 PIGXQ8TBF5 258 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 GEMIN6Q8WXD5 167 aaKnown RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 SLC25A36Q96CQ1 311 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 MPP4Q96JB8 637 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 PRSS27Q9BQR3 290 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 TMEM43Q9BTV4 400 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 RBM24Q9BX46 236 aaKnown RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 POLR2J2Q9GZM3 115 aaKnown RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 POLR2J3Q9H1A7 115 aaKnown RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 RIMS3Q9UJD0 308 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 FOXD3Q9UJU5 478 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 A4GNTQ9UNA3 340 aa12.05□□□□□ -0.48
COL1A1-208ENST00000494334 SAMD4AQ9UPU9 718 aaKnown RBP12.05□□□□□ -0.48
COL1A1-208ENST00000494334 AQP7P3A6NL99 342 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 J3KTA2 159 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 ARPC2O15144 300 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 FZD7O75084 574 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 IFNW1P05000 195 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 YAP1P46937 504 aaKnown RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 SLC16A1P53985 500 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 TTC33Q6PID6 262 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 TSEN54Q7Z6J9 526 aaKnown RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 NKAIN4Q8IVV8 208 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 FAM86B1Q8N7N1 296 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 OR6S1Q8NH40 331 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 SLC7A6OSQ96CW6 309 aaPredicted RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 PRRC1Q96M27 445 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 EPYCQ99645 322 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 SPOCK3Q9BQ16 436 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 TACO1Q9BSH4 297 aaKnown RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF426Q9BUY5 554 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 C12orf49Q9H741 205 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 PRPF19Q9UMS4 504 aaKnown RBP12.04□□□□□ -0.48
COL1A1-208ENST00000494334 CACNA1CQ13936 2221 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 PTPN13Q12923 2485 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 NBPF19A0A087WUL8 3843 aa12.04□□□□□ -0.48
COL1A1-208ENST00000494334 LRRN3E7EW58 273 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 PDE5AO76074 875 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 BGLAPP02818 100 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 THRBP10828 461 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 FUT4P22083 530 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 CBLP22681 906 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 NTF4P34130 210 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 MS4A2Q01362 244 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 BNIP1Q12981 228 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 SLC17A1Q14916 467 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 TMEM225Q6GV28 225 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 MEX3BQ6ZN04 569 aaKnown RBP12.03□□□□□ -0.48
COL1A1-208ENST00000494334 GALNT5Q7Z7M9 940 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 DMRTC2Q8IXT2 367 aaPredicted RBP12.03□□□□□ -0.48
COL1A1-208ENST00000494334 PYURFQ96I23 114 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 CLPTM1LQ96KA5 538 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 THTPAQ9BU02 230 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
COL1A1-208ENST00000494334 GALNT8Q9NY28 637 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 ACTR3BQ9P1U1 418 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 SEC14L4Q9UDX3 406 aa12.03□□□□□ -0.48
COL1A1-208ENST00000494334 M0R082 166 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 GPR171O14626 319 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 FFAR1O14842 300 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 GYG2O15488 501 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 PRSS23O95084 383 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 VAMP5O95183 116 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 COX6B1P14854 86 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 EDNRAP25101 427 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 GTF2E2P29084 291 aaKnown RBP12.02□□□□□ -0.49
COL1A1-208ENST00000494334 GRPRP30550 384 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 CD79BP40259 229 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 ST3GAL3Q11203 375 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 FOXD4Q12950 439 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-208ENST00000494334 TRIM25Q14258 630 aaKnown RBP12.02□□□□□ -0.49
COL1A1-208ENST00000494334 MFSD13AQ14CX5 517 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 TFAP2EQ6VUC0 442 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms