RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 AZIN1O14977 448 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 SYNGR3O43761 229 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 BCAS1O75363 584 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 KRT33AO76009 404 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 CBR1P16152 277 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 RYKP34925 604 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 POLR2HP52434 150 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 TMEM33P57088 247 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 ETF1P62495 437 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 UBA52P62987 128 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 MRPS11P82912 194 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 FAM153CQ494X1 144 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 MIDNQ504T8 468 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 C8orf74Q6P047 294 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 MYPOPQ86VE0 399 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 IL17RDQ8NFM7 739 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 RDH5Q92781 318 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 COQ8BQ96D53 544 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 ALKBH3Q96Q83 286 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 TPK1Q9H3S4 243 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 SLC52A3Q9NQ40 469 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 DCDC2Q9UHG0 476 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 OSGIN1Q9UJX0 560 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 TMED7Q9Y3B3 224 aa12.27□□□□□ -0.45
PRPF40A-211ENST00000493468 LOC105371242A0A075B767 164 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 TMEM72A0PK05 275 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 SH3PXD2BA1X283 911 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 M0R233 179 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 NR5A2O00482 541 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 LYPLA1O75608 230 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 AGR2O95994 175 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 BCL10O95999 233 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 CHEK2O96017 543 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 AVPP01185 164 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 GPIP06744 558 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 ANPEPP15144 967 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 MATN1P21941 496 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 MAPK1P28482 360 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 LMO4P61968 165 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 RPS26P62854 115 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 TUBA1BP68363 451 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 TUBA4AP68366 448 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 PLAURQ03405 335 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 OCLNQ16625 522 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 TYW3Q6IPR3 259 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 TUBA1AQ71U36 451 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 C16orf62Q7Z3J2 963 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 ARFGAP2Q8N6H7 521 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 ANKK1Q8NFD2 765 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 OR5AK3PQ8NH89 298 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 MIPOL1Q8TD10 442 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 FMO2Q99518 471 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 SLC6A7Q99884 636 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 LINC00470Q9BZP3 86 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 EXD2Q9NVH0 621 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 TREM2Q9NZC2 230 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 CMAHPQ9Y471 501 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 NOTCH1P46531 2555 aa12.26□□□□□ -0.45
PRPF40A-211ENST00000493468 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 J3QLI3 93 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 FAAHO00519 579 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 GLRA3O75311 464 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 VAMP5O95183 116 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 PROCP04070 461 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 CELA3BP08861 270 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 ABHD2P08910 425 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 LINC00032P0C843 101 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 CCNA2P20248 432 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 ARR3P36575 388 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 IDH2P48735 452 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 HBA1P69905 142 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 MYBPC1Q00872 1141 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 SNTB2Q13425 540 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 DAG1Q14118 895 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 GALNTL6Q49A17 601 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 KANK2Q63ZY3 851 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 LINGO2Q7L985 606 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 CARM1Q86X55 608 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 BPIFB2Q8N4F0 458 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 TMEM99Q8N816 258 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 SLC35G5Q96KT7 338 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 PRPF18Q99633 342 aaKnown RBP12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF416Q9BWM5 594 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 TMPRSS13Q9BYE2 586 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 NARFLQ9H6Q4 476 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 NTN4Q9HB63 628 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 NOX3Q9HBY0 568 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF275Q9NSD4 429 aaPredicted RBP12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 OXSMQ9NWU1 459 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 REV1Q9UBZ9 1251 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 WDR45Q9Y484 360 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 DNAJC15Q9Y5T4 150 aa12.25□□□□□ -0.45
PRPF40A-211ENST00000493468 A0A096LPE4 126 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 A0A0G2JMP0 313 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 A0A0X1KG70 313 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 A0A1W2PPZ6 126 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 ZC3H12DA2A288 527 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms