RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ARPC2O15144 300 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 AKAP8O43823 692 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 TPST2O60704 377 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 CYTIPO60759 359 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 GCM2O75603 506 aaPredicted RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 DNAJC8O75937 253 aaPredicted RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 KRT33AO76009 404 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 AQP8O94778 261 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 TOXO94900 526 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 THRBP10828 461 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 TNFRSF1BP20333 461 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 MSX2P35548 267 aaPredicted RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 SMIM11AP58511 58 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 PLAURQ03405 335 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 SRSF1Q07955 248 aaKnown RBP eCLIP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 C1DQ13901 141 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 EXOC3L2Q2M3D2 409 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 FAM98BQ52LJ0 330 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 PAQR6Q6TCH4 344 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 CYP2R1Q6VVX0 501 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 BEND4Q6ZU67 534 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 SEM1Q6ZVN7 128 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 VTCN1Q7Z7D3 282 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 RBM45Q8IUH3 476 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 TUSC5Q8IXB3 177 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 UBE2J2Q8N2K1 259 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 MFSD8Q8NHS3 518 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 RNF128Q8TEB7 428 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 CCDC124Q96CT7 223 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 PYURFQ96I23 114 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 ARL5BQ96KC2 179 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 PRRC1Q96M27 445 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 TMEM43Q9BTV4 400 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 PRR14Q9BWN1 585 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 SRXN1Q9BYN0 137 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 UCK2Q9BZX2 261 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 PCDHAC1Q9H158 963 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 DCAF13Q9NV06 445 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 TAS2R1Q9NYW7 299 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 ACTR3BQ9P1U1 418 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 KLHL13Q9P2N7 655 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 RIMS3Q9UJD0 308 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 RASD1Q9Y272 281 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 NOSIPQ9Y314 301 aaKnown RBP7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 MED31Q9Y3C7 131 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 CORINQ9Y5Q5 1042 aa7.27□□□□□ -1.25
TM4SF1-204ENST00000493348 ZC3H12DA2A288 527 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 LIPT2A6NK58 231 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF724A8MTY0 619 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 TMEM229AB2RXF0 380 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 KDM4EB2RXH2 506 aaPredicted RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 MSTNO14793 375 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 SMAD9O15198 467 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 SS18L1O75177 396 aaPredicted RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 MRPL33O75394 65 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 CIB2O75838 187 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 PDE5AO76074 875 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 AKR7A3O95154 331 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 MT-ATP6P00846 226 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 FABP3P05413 133 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 T-ENOLP0DO92 83 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 IMPDH2P12268 514 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 POU2F1P14859 743 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF43P17038 809 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 CBLP22681 906 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 AHCYP23526 432 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 AGTR1P30556 359 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 RBM34P42696 430 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 YAP1P46937 504 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 CHRNB3Q05901 458 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 TRAP1Q12931 704 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 FOXF2Q12947 444 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 PMS2P3Q13401 168 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 PIN1Q13526 163 aaPredicted RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 TRIM25Q14258 630 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 TRAM2Q15035 370 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 PDK3Q15120 406 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 FBXW10Q5XX13 1052 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 SP5Q6BEB4 398 aaPredicted RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 VWA1Q6PCB0 445 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 C6orf89Q6UWU4 347 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF730Q6ZMV8 503 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 GDF7Q7Z4P5 450 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 NAXEQ8NCW5 288 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 PIK3C3Q8NEB9 887 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 ABHD3Q8WU67 409 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 RNASE6Q93091 150 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 ASB9Q96DX5 294 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 ZNF347Q96SE7 839 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 SEPHS2Q99611 448 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 SF3B5Q9BWJ5 86 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 SLC19A3Q9BZV2 496 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 MCCC2Q9HCC0 563 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 NANSQ9NR45 359 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 GMPR2Q9P2T1 348 aaKnown RBP7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 UPB1Q9UBR1 384 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 CD300AQ9UGN4 299 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 NDRG3Q9UGV2 375 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 TMCC3Q9ULS5 477 aa7.26□□□□□ -1.25
TM4SF1-204ENST00000493348 USP9YO00507 2555 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms