RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 NDUFAF1Q9Y375 327 aa12.01□□□□□ -0.49
IRF1-210ENST00000493208 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
IRF1-210ENST00000493208 ITPR3Q14573 2671 aa12.01□□□□□ -0.49
IRF1-210ENST00000493208 AKAP6Q13023 2319 aa12□□□□□ -0.49
IRF1-210ENST00000493208 LIPT2A6NK58 231 aa12□□□□□ -0.49
IRF1-210ENST00000493208 AQP7P3A6NL99 342 aa12□□□□□ -0.49
IRF1-210ENST00000493208 VSTM5A8MXK1 200 aa12□□□□□ -0.49
IRF1-210ENST00000493208 ZNF587BE7ETH6 402 aa12□□□□□ -0.49
IRF1-210ENST00000493208 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
IRF1-210ENST00000493208 MPGP29372 298 aa12□□□□□ -0.49
IRF1-210ENST00000493208 MVDP53602 400 aa12□□□□□ -0.49
IRF1-210ENST00000493208 CDH11P55287 796 aa12□□□□□ -0.49
IRF1-210ENST00000493208 SH3BGRP55822 239 aaPredicted RBP12□□□□□ -0.49
IRF1-210ENST00000493208 UBE2NP61088 152 aaKnown RBP12□□□□□ -0.49
IRF1-210ENST00000493208 RBBP4Q09028 425 aa12□□□□□ -0.49
IRF1-210ENST00000493208 C1DQ13901 141 aaKnown RBP12□□□□□ -0.49
IRF1-210ENST00000493208 SCARB2Q14108 478 aa12□□□□□ -0.49
IRF1-210ENST00000493208 SLC17A1Q14916 467 aa12□□□□□ -0.49
IRF1-210ENST00000493208 CYP51A1Q16850 503 aa12□□□□□ -0.49
IRF1-210ENST00000493208 FAM91A1Q658Y4 838 aa12□□□□□ -0.49
IRF1-210ENST00000493208 ULK3Q6PHR2 472 aa12□□□□□ -0.49
IRF1-210ENST00000493208 SLC22A25Q6T423 547 aa12□□□□□ -0.49
IRF1-210ENST00000493208 C11orf65Q8NCR3 313 aa12□□□□□ -0.49
IRF1-210ENST00000493208 HIPK4Q8NE63 616 aa12□□□□□ -0.49
IRF1-210ENST00000493208 OR9K2Q8NGE7 335 aa12□□□□□ -0.49
IRF1-210ENST00000493208 OR52E4Q8NGH9 312 aa12□□□□□ -0.49
IRF1-210ENST00000493208 MFSD8Q8NHS3 518 aa12□□□□□ -0.49
IRF1-210ENST00000493208 RNF217Q8TC41 542 aa12□□□□□ -0.49
IRF1-210ENST00000493208 SLCO1B3Q9NPD5 702 aa12□□□□□ -0.49
IRF1-210ENST00000493208 DLL4Q9NR61 685 aa12□□□□□ -0.49
IRF1-210ENST00000493208 ZNF701Q9NV72 531 aaPredicted RBP12□□□□□ -0.49
IRF1-210ENST00000493208 CISD1Q9NZ45 108 aaKnown RBP12□□□□□ -0.49
IRF1-210ENST00000493208 ING1Q9UK53 422 aaPredicted RBP12□□□□□ -0.49
IRF1-210ENST00000493208 FBXO9Q9UK97 447 aaPredicted RBP12□□□□□ -0.49
IRF1-210ENST00000493208 GMEB1Q9Y692 573 aa12□□□□□ -0.49
IRF1-210ENST00000493208 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
IRF1-210ENST00000493208 ABCD4O14678 606 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 AIM2O14862 343 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 BCAS1O75363 584 aaPredicted RBP11.99□□□□□ -0.49
IRF1-210ENST00000493208 IGHV3-9P01782 118 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 ARAFP10398 606 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 IMPDH2P12268 514 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 ZNF43P17038 809 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 LOXP28300 417 aaPredicted RBP11.99□□□□□ -0.49
IRF1-210ENST00000493208 ACAA2P42765 397 aaKnown RBP11.99□□□□□ -0.49
IRF1-210ENST00000493208 PPP2R2BQ00005 443 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 IL1RL1Q01638 556 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 MAPRE2Q15555 327 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 TSC22D1Q15714 1073 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 KRTAP21-3Q3LHN1 58 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 HSP90B2PQ58FF3 399 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 ALG10BQ5I7T1 473 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
IRF1-210ENST00000493208 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
IRF1-210ENST00000493208 DHRS4L2Q6PKH6 230 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 ARMC8Q8IUR7 673 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 CCDC103Q8IW40 242 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 FBXL14Q8N1E6 418 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 LSMEM1Q8N8F7 131 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 OR52N5Q8NH56 324 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 SLC26A7Q8TE54 656 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 CKAP2Q8WWK9 683 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 SLC47A1Q96FL8 570 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 MUS81Q96NY9 551 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 GRIP2Q9C0E4 1043 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 SLC6A13Q9NSD5 602 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 B3GALT5Q9Y2C3 310 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 CORINQ9Y5Q5 1042 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 PCNX3Q9H6A9 2034 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 MED13LQ71F56 2210 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
IRF1-210ENST00000493208 FRS3O43559 492 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 ENTPD5O75356 428 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 AKR7A3O95154 331 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 HEXAP06865 529 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 RGS8P57771 180 aaPredicted RBP11.98□□□□□ -0.49
IRF1-210ENST00000493208 CHRNB3Q05901 458 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 GTDC1Q4AE62 458 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 FAM69AQ5T7M9 428 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 HMBOX1Q6NT76 420 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 ZNF544Q6NX49 715 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 C22orf34Q6ZV56 151 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 DHDDSQ86SQ9 333 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 SERPINA11Q86U17 422 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 CCDC36Q8IYA8 594 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 NFKBIDQ8NI38 313 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 C3orf49Q96BT1 292 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 ZNF524Q96C55 264 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 SLC25A36Q96CQ1 311 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 COX4I2Q96KJ9 171 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 EBF4Q9BQW3 602 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 ASPNQ9BXN1 380 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 B3GAT2Q9NPZ5 323 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 RCE1Q9Y256 329 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 AKAP9Q99996 3911 aa11.98□□□□□ -0.49
IRF1-210ENST00000493208 PRRC2AP48634 2157 aaKnown RBP11.98□□□□□ -0.49
IRF1-210ENST00000493208 TRAV36DV7A0A075B6V5 113 aa11.97□□□□□ -0.49
IRF1-210ENST00000493208 A0A0G2JND7 137 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms