RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SLC1A3P43003 542 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 CDH12P55289 794 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 SUMO3P55854 103 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-206ENST00000493039 B3GALT5-AS1P59052 145 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 PPP1R8Q12972 351 aaKnown RBP8.48□□□□□ -1.05
CSTF1-206ENST00000493039 CBFBQ13951 182 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 GANABQ14697 944 aaKnown RBP8.48□□□□□ -1.05
CSTF1-206ENST00000493039 SLC25A53Q5H9E4 307 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 HMBOX1Q6NT76 420 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 LINC00114Q6XXX2 140 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 CCDC36Q8IYA8 594 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 OR4K17Q8NGC6 315 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 OR56B2PQ8NGI1 322 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 FUZQ9BT04 418 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 ZDHHC11Q9H8X9 412 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 NMNAT1Q9HAN9 279 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-206ENST00000493039 ACER3Q9NUN7 267 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 TAS2R10Q9NYW0 307 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 TESQ9UGI8 421 aaKnown RBP8.48□□□□□ -1.05
CSTF1-206ENST00000493039 RIMS3Q9UJD0 308 aa8.48□□□□□ -1.05
CSTF1-206ENST00000493039 BOKQ9UMX3 212 aaPredicted RBP8.48□□□□□ -1.05
CSTF1-206ENST00000493039 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 TRIM77I1YAP6 450 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 ERVH48-1M5A8F1 160 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 SMPD2O60906 423 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 NUDT14O95848 222 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 RHCEP18577 417 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 PGCP20142 388 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 TCEA1P23193 301 aaKnown RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 SLC6A8P48029 635 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 LIMS1P48059 325 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 IST1P53990 364 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 DSCR4P56555 118 aaPredicted RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 PPIAP62937 165 aaKnown RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 RPUSD3Q6P087 351 aaKnown RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 GDF7Q7Z4P5 450 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 KCTD20Q7Z5Y7 419 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 TMEM179BQ7Z7N9 219 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 YRDCQ86U90 279 aaKnown RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 ADGRG3Q86Y34 549 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 SIAH3Q8IW03 269 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 CADM2Q8N3J6 435 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 FAM83FQ8NEG4 500 aaPredicted RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 LRTOMTQ8WZ04 291 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 POP5Q969H6 163 aaKnown RBP8.47□□□□□ -1.05
CSTF1-206ENST00000493039 PNPLA2Q96AD5 504 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF559Q9BR84 538 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 TRIM2Q9C040 744 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 EVA1AQ9H8M9 152 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 OSGIN1Q9UJX0 560 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF407Q9C0G0 2248 aa8.47□□□□□ -1.05
CSTF1-206ENST00000493039 TXNL1O43396 289 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 CLPTM1O96005 669 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 HPNP05981 417 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 HSMCR30P0CW71 290 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 TACR3P29371 465 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 SRD5A2P31213 254 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 HMGA2P52926 109 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 LGALS3BPQ08380 585 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 FOXF1Q12946 379 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 GFOD2Q3B7J2 385 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 WBP2NLQ6ICG8 309 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF613Q6PF04 617 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 NLRC3Q7RTR2 1065 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 AMIGO2Q86SJ2 522 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 RANBP3LQ86VV4 465 aaPredicted RBP8.46□□□□□ -1.05
CSTF1-206ENST00000493039 SLC7A13Q8TCU3 470 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 SLC38A4Q969I6 547 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 PRRC1Q96M27 445 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 PKP2Q99959 881 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 ZNF426Q9BUY5 554 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 OR2B2Q9GZK3 357 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.05
CSTF1-206ENST00000493039 PTGES2Q9H7Z7 377 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 SP140LQ9H930 580 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 AGPAT4Q9NRZ5 378 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 KLHL9Q9P2J3 617 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 MRPS18CQ9Y3D5 142 aaKnown RBP8.46□□□□□ -1.05
CSTF1-206ENST00000493039 TESMINQ9Y4I5 508 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 FREM3P0C091 2139 aa8.46□□□□□ -1.05
CSTF1-206ENST00000493039 IGKV1D-42A0A075B6H8 117 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 TRBV4-1A0A0J9YWV2 114 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 OR2M5A3KFT3 312 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 TRAPPC13A5PLN9 417 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 RASAL1O95294 804 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 PTNP21246 168 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 GDF1P27539 372 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 GFRA1P56159 465 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 EGR4Q05215 589 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 SEC23BQ15437 767 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 AANATQ16613 207 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 WIPI1Q5MNZ9 446 aaPredicted RBP8.46□□□□□ -1.06
CSTF1-206ENST00000493039 C1QL3Q5VWW1 255 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 ZNF324BQ6AW86 544 aaPredicted RBP8.46□□□□□ -1.06
CSTF1-206ENST00000493039 OR2T5Q6IEZ7 315 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 OFCC1Q8IZS5 231 aa8.46□□□□□ -1.06
CSTF1-206ENST00000493039 GTPBP8Q8N3Z3 284 aaPredicted RBP8.46□□□□□ -1.06
CSTF1-206ENST00000493039 OR4C15Q8NGM1 316 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms