RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZNF544Q6NX49 715 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 KLHL17Q6TDP4 642 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 VRK2Q86Y07 508 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM99Q8N816 258 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 FAM169BQ8N8A8 192 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ANKRD42Q8N9B4 389 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ANKK1Q8NFD2 765 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 OR9K2Q8NGE7 335 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 OR52E4Q8NGH9 312 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PNPT1Q8TCS8 783 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 VPS33AQ96AX1 596 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ITCHQ96J02 903 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 C7orf26Q96N11 449 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF385AQ96PM9 386 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 OR52B2Q96RD2 323 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PAIP2Q9BPZ3 127 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PAIP1Q9H074 479 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 BARX1Q9HBU1 254 aaPredicted RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 A4GALTQ9NPC4 353 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 OBP2BQ9NPH6 170 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 CBLN4Q9NTU7 201 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 FAIMQ9NVQ4 179 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PCDHB14Q9Y5E9 798 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ANK3Q12955 4377 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.33□□□□□ -1.248e-7■■■□□ 18.6
SMARCB1-207ENST00000491967 TRBV5-3A0A0A0MS03 114 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 LOC102725191A0A1B0GVB3 256 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ELOA3DA6NLF2 546 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CCT8L1PA6NM43 557 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 RNF223E7ERA6 249 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 UBDO15205 165 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 TLX2O43763 284 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CD5LO43866 347 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF432O94892 652 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 AKR7A3O95154 331 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 TGDSO95455 350 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 GKN3PP0CG01 181 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ETS2P15036 469 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CCNA2P20248 432 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CXCR1P25024 350 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 PCSK6P29122 969 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CDH11P55287 796 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 DSTNP60981 165 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC25A3Q00325 362 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 TGFBR3Q03167 851 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 EGR4Q05215 589 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 SPOCK1Q08629 439 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 FADDQ13158 208 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CEACAM7Q14002 265 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 LARS2Q15031 903 aaKnown RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 MST1LQ2TV78 715 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 C3orf36Q3SXR2 165 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ELOA3BQ3SY89 546 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 OTUD3Q5T2D3 398 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 C1orf140Q5VVS0 124 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 BLOC1S3Q6QNY0 202 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 NHLRC1Q6VVB1 395 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 B3GLCTQ6Y288 498 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CREB3L2Q70SY1 520 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 LSRQ86X29 649 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 EPHX4Q8IUS5 362 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 FUNDC1Q8IVP5 155 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 MSRB3Q8IXL7 192 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 UBE2J2Q8N2K1 259 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 LSMEM1Q8N8F7 131 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 POMGNT2Q8NAT1 580 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ELOA3Q8NG57 546 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 OR9I1Q8NGQ6 314 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 OR52N5Q8NH56 324 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 MFSD8Q8NHS3 518 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 MAGEE2Q8TD90 523 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 STK35Q8TDR2 534 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 C3orf49Q96BT1 292 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 AURKBQ96GD4 344 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM19Q96HH6 336 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF317Q96PQ6 595 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 MDFIQ99750 246 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 PTDSS2Q9BVG9 487 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 LINC00470Q9BZP3 86 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 RMND5AQ9H871 391 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 C12orf10Q9HB07 376 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC25A37Q9NYZ2 338 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 CRNNQ9UBG3 495 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 GDF2Q9UK05 429 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF232Q9UNY5 417 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF443Q9Y2A4 671 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 AMDHD2Q9Y303 409 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 IFT52Q9Y366 437 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 USH1CQ9Y6N9 552 aa7.33□□□□□ -1.24
SMARCB1-207ENST00000491967 ARPC4-TTLL3A0A0A6YYG9 625 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 OR6C65A6NJZ3 312 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 RPL36A-HNRNPH2H7BZ11 118 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 CLIC1O00299 241 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 FRS3O43559 492 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 IGLV1-44P01699 117 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 BCHEP06276 602 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 NUDT7P0C024 238 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms