RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 S100A1P23297 94 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF84P51523 738 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 CTBP2P56545 445 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 RPS15P62841 145 aaKnown RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 OC90Q02509 493 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 IRF3Q14653 427 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 OXA1LQ15070 435 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 TBC1D25Q3MII6 688 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 DESI1Q6ICB0 168 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 VASH1Q7L8A9 365 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 LYSMD2Q8IV50 215 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 OR5J2Q8NH18 312 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 C10orf90Q96M02 699 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 WDR76Q9H967 626 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 FKRPQ9H9S5 495 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 TAS2R8Q9NYW2 309 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NTMQ9P121 344 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NPFFR2Q9Y5X5 522 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 MYLKQ15746 1914 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 ZFC3H1O60293 1989 aaKnown RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NAP1L6A6NFF2 107 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 HSPB2A8KAH6 182 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 SEC14L5O43304 696 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM127O75204 238 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 SULT1C4O75897 302 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 SMIM10L1P0DMW3 83 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 CD97P48960 835 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 DIO1P49895 249 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 KCNAB1Q14722 419 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 HSPB2Q16082 182 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 PRTGQ2VWP7 1150 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NKAIN1Q4KMZ8 207 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 YIF1BQ5BJH7 314 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 FAM69AQ5T7M9 428 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 TMPRSS12Q86WS5 348 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 POGLUT1Q8NBL1 392 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 CHST4Q8NCG5 386 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 OR4D11Q8NGI4 311 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 SMIM10Q96HG1 83 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NMNAT3Q96T66 252 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 MENTQ9BUN1 341 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 ABCG5Q9H222 651 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 RNF121Q9H920 327 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NRIP3Q9NQ35 241 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 IFT46Q9NQC8 304 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 A0A087WUJ7 227 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 CDC14CA4D256 554 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 HPGDSO60760 199 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 CBX7O95931 251 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 P04436 131 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 CELA2BP08218 269 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 NR4A2P43354 598 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 FNTBP49356 437 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 IL10RAQ13651 578 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 COL9A2Q14055 689 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 EIF2B1Q14232 305 aaKnown RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 STEAP3Q658P3 488 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 WDR88Q6ZMY6 472 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF627Q7L945 461 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 GPAT4Q86UL3 456 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 JAGN1Q8N5M9 183 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 FRMD1Q8N878 549 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM43Q9BTV4 400 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 GAREM1Q9H706 876 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 C12orf10Q9HB07 376 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 ELL3Q9HB65 397 aaPredicted RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 EXOSC3Q9NQT5 275 aaKnown RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 ZC4H2Q9NQZ6 224 aa6.75□□□□□ -1.33
NPHP3-208ENST00000490993 DNAJB12Q9NXW2 375 aaKnown RBP6.75□□□□□ -1.33
NPHP3-208ENST00000490993 A0A1W2PPK0 400 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM212A6NML5 194 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 C1QCP02747 245 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 GUSBP08236 651 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ICAM2P13598 275 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 MAKP20794 623 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 APOBEC1P41238 236 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SMAD2Q15796 467 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 RAB11BQ15907 218 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF770Q6IQ21 691 aaPredicted RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 PAPD4Q6PIY7 484 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 PRSS41Q7RTY9 318 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 GHSRQ92847 366 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SLIRPQ9GZT3 109 aaKnown RBP6.74□□□□□ -1.33
NPHP3-208ENST00000490993 HPF1Q9NWY4 346 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 KLHL9Q9P2J3 617 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 RASD1Q9Y272 281 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 V9GY05 133 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 CROCCQ5TZA2 2017 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 IGHV1OR21-1A0A087WYE8 117 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 RBBP9O75884 186 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SCGNO76038 276 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 IGLV3-19P01714 112 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 IL7P13232 177 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 SDHAP31040 664 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 OR7A5Q15622 319 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 NTRK2Q16620 822 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 TBRG1Q3YBR2 411 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 BCL2L15Q5TBC7 163 aa6.74□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF782Q6ZMW2 699 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms