RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 WDR31Q8NA23 367 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 OR9I1Q8NGQ6 314 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 SLC38A5Q8WUX1 472 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 VPS33AQ96AX1 596 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 TMEM19Q96HH6 336 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 ZNF385AQ96PM9 386 aaKnown RBP18.4■□□□□ 0.54
SYNE4-205ENST00000490730 OR52B2Q96RD2 323 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 MDFIQ99750 246 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 RHNO1Q9BSD3 238 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 SLC17A5Q9NRA2 495 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 ZIM2Q9NZV7 527 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 AMDHD2Q9Y303 409 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 DSPPQ9NZW4 1301 aa18.4■□□□□ 0.54
SYNE4-205ENST00000490730 UBDO15205 165 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 CRLF1O75462 422 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 KRT33AO76009 404 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 TFPTP0C1Z6 253 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 PRG2P13727 222 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 ACAA2P42765 397 aaKnown RBP18.39■□□□□ 0.53
SYNE4-205ENST00000490730 POLR2JP52435 117 aaKnown RBP18.39■□□□□ 0.53
SYNE4-205ENST00000490730 SLC25A3Q00325 362 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 MAVSQ7Z434 540 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 CLIP4Q8N3C7 705 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 C17orf78Q8N4C9 275 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 C1orf162Q8NEQ5 155 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-205ENST00000490730 TMEM45BQ96B21 275 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 MAELQ96JY0 434 aaKnown RBP18.39■□□□□ 0.53
SYNE4-205ENST00000490730 FKRPQ9H9S5 495 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 SDR39U1Q9NRG7 319 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-205ENST00000490730 YAE1D1Q9NRH1 226 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 ZNF232Q9UNY5 417 aa18.39■□□□□ 0.53
SYNE4-205ENST00000490730 ABCA1O95477 2261 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 ANK3Q12955 4377 aaKnown RBP18.38■□□□□ 0.53
SYNE4-205ENST00000490730 AQP7P3A6NL99 342 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 A8MVM7 634 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 ZCCHC18P0CG32 403 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 MPGP29372 298 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 RAB35Q15286 201 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 RNF220Q5VTB9 566 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 TMEM225Q6GV28 225 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 C11orf71Q6IPW1 123 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 CLEC2AQ6UVW9 174 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 DNM1P46Q6ZS02 220 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 SERPINA11Q86U17 422 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 MIER2Q8N344 545 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 ZIC4Q8N9L1 334 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 SF3B5Q9BWJ5 86 aaKnown RBP18.38■□□□□ 0.53
SYNE4-205ENST00000490730 AMBRA1Q9C0C7 1298 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 ARMC7Q9H6L4 198 aa18.38■□□□□ 0.53
SYNE4-205ENST00000490730 IGHV4-30-2A0A087WSY4 118 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 KLF11O14901 512 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 WNT11O96014 354 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 PRPS1P60891 318 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 HIKESHIQ53FT3 197 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 C1orf140Q5VVS0 124 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 MSANTD1Q6ZTZ1 278 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 POMGNT2Q8NAT1 580 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 THUMPD1Q9NXG2 353 aaKnown RBP18.37■□□□□ 0.53
SYNE4-205ENST00000490730 ALPK2Q86TB3 2170 aa18.37■□□□□ 0.53
SYNE4-205ENST00000490730 A0A0G2JPF8 293 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 FAM234BA2RU67 622 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 HNRNPCL2B2RXH8 293 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 HNRNPCL3B7ZW38 293 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 ATP6V1G2-DDX39BF2Z307 99 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 FRS3O43559 492 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 CD5LO43866 347 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 HNRNPCL1O60812 293 aaKnown RBP18.36■□□□□ 0.53
SYNE4-205ENST00000490730 NUDT7P0C024 238 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 HNRNPCL4P0DMR1 293 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 SLC18A1P54219 525 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 HOXC5Q00444 222 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 LGALS3BPQ08380 585 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 ZSWIM7Q19AV6 140 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 ZNF311Q5JNZ3 666 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 PRAMEF8Q5VWM4 474 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 PRAMEF7Q5VXH5 474 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 ZNF544Q6NX49 715 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 SLC2A7Q6PXP3 512 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 ABHD12BQ7Z5M8 362 aaPredicted RBP18.36■□□□□ 0.53
SYNE4-205ENST00000490730 MAL2Q969L2 176 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 SPATA9Q9BWV2 254 aa18.36■□□□□ 0.53
SYNE4-205ENST00000490730 ATRQ13535 2644 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 C5orf58C9J3I9 102 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 ZNF525Q8N782 197 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 C3orf49Q96BT1 292 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 SLC25A36Q96CQ1 311 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 ALKBH3Q96Q83 286 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-205ENST00000490730 IFT52Q9Y366 437 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 CHST2Q9Y4C5 530 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 PCDHB14Q9Y5E9 798 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 USH1CQ9Y6N9 552 aa18.35■□□□□ 0.53
SYNE4-205ENST00000490730 A0A096LPI6 279 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 ZNF587BE7ETH6 402 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 TLX2O43763 284 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-205ENST00000490730 GPRIN2O60269 458 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 ERLIN1O75477 346 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 AHSA1O95433 338 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 LGI1O95970 557 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 BMP4P12644 408 aa18.34■□□□□ 0.53
SYNE4-205ENST00000490730 GTF2E2P29084 291 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms