RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 OAFQ86UD1 273 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 GGNQ86UU5 652 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 P3H2Q8IVL5 708 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 CISD2Q8N5K1 135 aaKnown RBP11.91□□□□□ -0.5
SNX12-205ENST00000490561 OR5J2Q8NH18 312 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 MAGEE2Q8TD90 523 aaPredicted RBP11.91□□□□□ -0.5
SNX12-205ENST00000490561 GTPBP3Q969Y2 492 aaKnown RBP11.91□□□□□ -0.5
SNX12-205ENST00000490561 CPNE4Q96A23 557 aaPredicted RBP11.91□□□□□ -0.5
SNX12-205ENST00000490561 ARL5BQ96KC2 179 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 C20orf141Q9NUB4 165 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
SNX12-205ENST00000490561 LUZP4Q9P127 313 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 B3GALT5Q9Y2C3 310 aa11.91□□□□□ -0.5
SNX12-205ENST00000490561 MAGED1Q9Y5V3 778 aaPredicted RBP11.91□□□□□ -0.5
SNX12-205ENST00000490561 ATXN7O15265 892 aaPredicted RBP11.9□□□□□ -0.5
SNX12-205ENST00000490561 SEC14L5O43304 696 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 WISP1O95388 367 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 ASAH2BP0C7U1 165 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 IMPDH2P12268 514 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 OSMP13725 252 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 ZNF26P17031 533 aaPredicted RBP11.9□□□□□ -0.5
SNX12-205ENST00000490561 MAKP20794 623 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 GRPRP30550 384 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 HSPA13P48723 471 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 DIO1P49895 249 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 CARD18P57730 90 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 ESRRGP62508 458 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 LY6DQ14210 128 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 OR7A5Q15622 319 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 SGCBQ16585 318 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 LRRC36Q1X8D7 754 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 ZBED5Q49AG3 693 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 WLSQ5T9L3 541 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 CHMP1BQ7LBR1 199 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 OR52L1Q8NGH7 329 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 NRG4Q8WWG1 115 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 OSTF1Q92882 214 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 SLC25A36Q96CQ1 311 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 ADGRG7Q96K78 797 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 TIMP4Q99727 224 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 NIPSNAP1Q9BPW8 284 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 SLX1AQ9BQ83 275 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 TEX12Q9BXU0 123 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 TSPAN10Q9H1Z9 355 aaPredicted RBP11.9□□□□□ -0.5
SNX12-205ENST00000490561 SMURF2Q9HAU4 748 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 SMPD3Q9NY59 655 aaPredicted RBP11.9□□□□□ -0.5
SNX12-205ENST00000490561 SPRR3Q9UBC9 169 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 CDH10Q9Y6N8 788 aa11.9□□□□□ -0.5
SNX12-205ENST00000490561 A0A0J9YW62 118 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 TNFSF11O14788 317 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 VAMP5O95183 116 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 OR6A2O95222 327 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 SYNGR4O95473 234 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 EDN3P14138 238 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 PTNP21246 168 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 SHC1P29353 583 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 PTGER4P35408 488 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 STARP49675 285 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 CLDN20P56880 219 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 LSM11P83369 360 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNX12-205ENST00000490561 IL1RL1Q01638 556 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 RBPJQ06330 500 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 PMS2P3Q13401 168 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 ZNF239Q16600 458 aaKnown RBP11.89□□□□□ -0.51
SNX12-205ENST00000490561 CTU2Q2VPK5 515 aaKnown RBP11.89□□□□□ -0.51
SNX12-205ENST00000490561 C1QL3Q5VWW1 255 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 SMARCD3Q6STE5 483 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 KLHL17Q6TDP4 642 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 PCSK4Q6UW60 755 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 ZNF620Q6ZNG0 422 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 H1FNTQ75WM6 255 aaPredicted RBP11.89□□□□□ -0.51
SNX12-205ENST00000490561 UBQLNLQ8IYU4 475 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 OR10D3Q8NH80 312 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 TEX47Q8TBZ9 253 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 FANK1Q8TC84 345 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
SNX12-205ENST00000490561 WDYHV1Q96HA8 205 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 MOGAT1Q96PD6 335 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 SLC29A1Q99808 456 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 GABARAPL3Q9BY60 117 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 CHST11Q9NPF2 352 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 TMEFF2Q9UIK5 374 aaPredicted RBP11.89□□□□□ -0.51
SNX12-205ENST00000490561 MCTS1Q9ULC4 181 aaKnown RBP11.89□□□□□ -0.51
SNX12-205ENST00000490561 RASD1Q9Y272 281 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 HIF3AQ9Y2N7 669 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 ACACBO00763 2458 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 LAMA5O15230 3695 aa11.89□□□□□ -0.51
SNX12-205ENST00000490561 PCNX3Q9H6A9 2034 aa11.88□□□□□ -0.51
SNX12-205ENST00000490561 CFAP47Q6ZTR5 3102 aa11.88□□□□□ -0.51
SNX12-205ENST00000490561 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
SNX12-205ENST00000490561 A0A1B0GTH9 108 aa11.88□□□□□ -0.51
SNX12-205ENST00000490561 AQP7P3A6NL99 342 aa11.88□□□□□ -0.51
SNX12-205ENST00000490561 M0R082 166 aa11.88□□□□□ -0.51
SNX12-205ENST00000490561 CDC42EP2O14613 210 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms