RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SYT14P1Q58G82 188 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 GCNT6Q5T4J0 391 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 MRPL2Q5T653 305 aaKnown RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 FAM91A1Q658Y4 838 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 NANOGP8Q6NSW7 305 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 REEP3Q6NUK4 255 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 ZNF836Q6ZNA1 936 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 TMPPEQ6ZT21 453 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 BHLHA15Q7RTS1 189 aaPredicted RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 NUFIP2Q7Z417 695 aaKnown RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 TREML1Q86YW5 311 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 CMIPQ8IY22 773 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 PEX5LQ8IYB4 626 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 ZNF100Q8IYN0 542 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 FITM2Q8N6M3 262 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 FAM71CQ8NEG0 241 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 PIGXQ8TBF5 258 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 SMAP2Q8WU79 429 aaPredicted RBP9.18□□□□□ -0.94
TTC28-207ENST00000490475 WDR60Q8WVS4 1066 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 LRRC58Q96CX6 371 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 OR5B2Q96R09 309 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 PSD2Q9BQI7 771 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 CCDC106Q9BWC9 280 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 PIF1Q9H611 641 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 NANOGQ9H9S0 305 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 BCL2L10Q9HD36 194 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 ACER3Q9NUN7 267 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 DSPPQ9NZW4 1301 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 HDGFL3Q9Y3E1 203 aa9.18□□□□□ -0.94
TTC28-207ENST00000490475 ZANQ9Y493 2812 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 IGKV3D-15A0A087WSY6 115 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 TRIM64A6NGJ6 449 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 TRIM64BA6NI03 449 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 OVOL3O00110 214 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 AP3D1O14617 1153 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 MRASO14807 208 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 SLC22A2O15244 555 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 CLOCKO15516 846 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 PMS2P2O95744 297 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 GKN3PP0CG01 181 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 COX4I1P13073 169 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 UQCRBP14927 111 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 GGT1P19440 569 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 PAX7P23759 505 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 SLC6A2P23975 617 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 AQP1P29972 269 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 IDH2P48735 452 aaKnown RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 DIO1P49895 249 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 GZMMP51124 257 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 MERTKQ12866 999 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 SCARB2Q14108 478 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 PPA1Q15181 289 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 MAPRE2Q15555 327 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 CLEC12BQ2HXU8 276 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 RABL3Q5HYI8 236 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 ZNF311Q5JNZ3 666 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 REP15Q6BDI9 236 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 OR7E24Q6IFN5 339 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 KLHL17Q6TDP4 642 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 TMEM108Q6UXF1 575 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 GRINAQ7Z429 371 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 PTOV1Q86YD1 416 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 OR10A6Q8NH74 314 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 RP9Q8TA86 221 aaKnown RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 ZNF563Q8TA94 476 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 RCN3Q96D15 328 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 MYLK2Q9H1R3 596 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 MMADHCQ9H3L0 296 aaPredicted RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 TMEM38AQ9H6F2 299 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 KAT8Q9H7Z6 458 aaKnown RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 EXOSC3Q9NQT5 275 aaKnown RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 PARPBPQ9NWS1 579 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 CHRNA9Q9UGM1 479 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 ZNF232Q9UNY5 417 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 CORO2BQ9UQ03 480 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 ZNF443Q9Y2A4 671 aaPredicted RBP9.17□□□□□ -0.94
TTC28-207ENST00000490475 CHST2Q9Y4C5 530 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 PLCE1Q9P212 2302 aa9.17□□□□□ -0.94
TTC28-207ENST00000490475 A0A1W2PNR3 127 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 CDHR4A6H8M9 788 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 BBIP1A8MTZ0 92 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 FXYD1O00168 92 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 AIM2O14862 343 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 FRS3O43559 492 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 TLX2O43763 284 aaPredicted RBP9.16□□□□□ -0.94
TTC28-207ENST00000490475 TPST1O60507 370 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 EIF1BO60739 113 aaKnown RBP9.16□□□□□ -0.94
TTC28-207ENST00000490475 PLAUP00749 431 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 NPPAP01160 153 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 DANCRP0C864 163 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 TFPIP10646 304 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 BMP4P12644 408 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 PRG2P13727 222 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 CCNA2P20248 432 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 COX5AP20674 150 aa9.16□□□□□ -0.94
TTC28-207ENST00000490475 PTAFRP25105 342 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms