RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CD3EP07766 207 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 HTR2AP28223 471 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 HOXC12P31275 282 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 RGS8P57771 180 aaPredicted RBP17.42■□□□□ 0.38
SMC4-222ENST00000490207 NKX6-1P78426 367 aaPredicted RBP17.42■□□□□ 0.38
SMC4-222ENST00000490207 FAPQ12884 760 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 GLIPR1L2Q4G1C9 344 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 TIMM23BQ5SRD1 257 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 C6orf89Q6UWU4 347 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 SSX8Q7RTT4 187 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 GPAT4Q86UL3 456 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 PTOV1Q86YD1 416 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 KRTAP1-3Q8IUG1 177 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 ARMC8Q8IUR7 673 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 LRRC75A-AS1Q8N1F1 130 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 C11orf65Q8NCR3 313 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 BHLHE22Q8NFJ8 381 aaPredicted RBP17.42■□□□□ 0.38
SMC4-222ENST00000490207 MUCL1Q96DR8 90 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 SLC13A4Q9UKG4 626 aa17.42■□□□□ 0.38
SMC4-222ENST00000490207 A0A1B0GWA3 101 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 CCT8L1PA6NM43 557 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 GTF2E2P29084 291 aaKnown RBP17.41■□□□□ 0.38
SMC4-222ENST00000490207 ARFIP2P53365 341 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 RBBP4Q09028 425 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 CGB2Q6NT52 195 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 P2RY8Q86VZ1 359 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 P3H2Q8IVL5 708 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 LSMEM1Q8N8F7 131 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 OR52E4Q8NGH9 312 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 AKAP1Q92667 903 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMC4-222ENST00000490207 TRIM2Q9C040 744 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 PIF1Q9H611 641 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 MRGBPQ9NV56 204 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 UPB1Q9UBR1 384 aa17.41■□□□□ 0.38
SMC4-222ENST00000490207 MAP1AP78559 2803 aaPredicted RBP17.41■□□□□ 0.38
SMC4-222ENST00000490207 OR5H1A6NKK0 313 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 ITGA5P08648 1049 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 VIMP08670 466 aaKnown RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 RPS5P46782 204 aaKnown RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 P2RY4P51582 365 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 PCBP3P57721 371 aaKnown RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 EGR4Q05215 589 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 BSPH1Q075Z2 132 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 DMTNQ08495 405 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 SF3A3Q12874 501 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMC4-222ENST00000490207 TRMT5Q32P41 509 aaKnown RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 ALG10BQ5I7T1 473 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 Q5PR19 223 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 SHEQ5VZ18 495 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 TMEM225Q6GV28 225 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 NET1Q7Z628 596 aaPredicted RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 ZNF611Q8N823 705 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 MFSD8Q8NHS3 518 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 DNAJA4Q8WW22 397 aaPredicted RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 SLC25A36Q96CQ1 311 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 ZNF385AQ96PM9 386 aaKnown RBP17.4■□□□□ 0.38
SMC4-222ENST00000490207 PTDSS2Q9BVG9 487 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 SLC7A10Q9NS82 523 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 NPAP1Q9NZP6 1156 aa17.4■□□□□ 0.38
SMC4-222ENST00000490207 FTCDNL1E5RQL4 147 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 PDLIM1O00151 329 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 ARHGEF9O43307 516 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 MFN2O95140 757 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 VAMP5O95183 116 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 PNMTP11086 282 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 FOXG1P55316 489 aaPredicted RBP17.39■□□□□ 0.37
SMC4-222ENST00000490207 GUCY1A3Q02108 690 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 TSPO2Q5TGU0 170 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 FAM91A1Q658Y4 838 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 ADAM5Q6NVV9 412 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 C5orf46Q6UWT4 87 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 AAED1Q7RTV5 226 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 RANBP3LQ86VV4 465 aaPredicted RBP17.39■□□□□ 0.37
SMC4-222ENST00000490207 SLC30A8Q8IWU4 369 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 ZIC4Q8N9L1 334 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 SMYD1Q8NB12 490 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 KBTBD8Q8NFY9 601 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 OR52N5Q8NH56 324 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 TMEM171Q8WVE6 324 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 SLC38A4Q969I6 547 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 FBXW5Q969U6 566 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 KTI12Q96EK9 354 aaPredicted RBP17.39■□□□□ 0.37
SMC4-222ENST00000490207 PERPQ96FX8 193 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 PRR14Q9BWN1 585 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 SLCO5A1Q9H2Y9 848 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 KAT8Q9H7Z6 458 aaKnown RBP17.39■□□□□ 0.37
SMC4-222ENST00000490207 EVA1AQ9H8M9 152 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 SELENONQ9NZV5 590 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 RASD1Q9Y272 281 aa17.39■□□□□ 0.37
SMC4-222ENST00000490207 ROS1P08922 2347 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 DPRXA6NFQ7 191 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 FBP2O00757 339 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 OPN1SWP03999 348 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 GABRA6Q16445 453 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 C9orf135Q5VTT2 229 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 OR7E24Q6IFN5 339 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 ULK3Q6PHR2 472 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 OR10A6Q8NH74 314 aa17.38■□□□□ 0.37
SMC4-222ENST00000490207 LILRB1Q8NHL6 650 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms