RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 HSDL1Q3SXM5 330 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 PAGE2BQ5JRK9 111 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TCEAL6Q6IPX3 200 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM207Q6UWW9 146 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 GDPD4Q6W3E5 623 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 FOXL2NBQ6ZUU3 175 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 RFPL4BQ6ZWI9 263 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ANKRD37Q7Z713 158 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 C17orf64Q86WR6 236 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM17Q86X19 198 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ERICH1Q86X53 443 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TGIF2LXQ8IUE1 241 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 RBM45Q8IUH3 476 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 CMTM8Q8IZV2 173 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 CLDN19Q8N6F1 224 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 LRRC20Q8TCA0 184 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 APOBEC4Q8WW27 367 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 MAIP1Q8WWC4 291 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 MYLPFQ96A32 169 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ELMO2Q96JJ3 720 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 PGLYRP2Q96PD5 576 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 MMP28Q9H239 520 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 OR51M1Q9H341 326 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 EBF2Q9HAK2 575 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 BEX1Q9HBH7 125 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 POPDC2Q9HBU9 364 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ADGRL4Q9HBW9 690 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM165Q9HC07 324 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 NT5MQ9NPB1 228 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF302Q9NR11 478 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 IGLV9-49A0A0B4J1Y8 123 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TRBV11-1A0A0K0K1C0 115 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SMCO2A6NFE2 343 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CCT8L1PA6NM43 557 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 MSH4O15457 936 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 RGS16O15492 202 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CHST1O43916 411 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 KIAA0513O60268 411 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 HCN1O60741 890 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 KRT33AO76009 404 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SCGNO76038 276 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 C1orf105O95561 183 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM50AO95807 157 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 IGSF6O95976 241 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 PAK4O96013 591 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 IGHG3P01860 377 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CRYAAP02489 173 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 APOA1P02647 267 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 NR3C1P04150 777 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TPM3P06753 285 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 AOC1P19801 751 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 BCKDHBP21953 392 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 IL32P24001 234 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OTX1P32242 354 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 FEN1P39748 380 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 NBL1P41271 181 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 LIM2P55344 173 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OGDHQ02218 1023 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 LRRC63Q05C16 580 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 GCKRQ14397 625 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 NCF4Q15080 339 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TIGITQ495A1 244 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TWF2Q6IBS0 349 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 BTNL3Q6UXE8 466 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 Q6ZVQ6 151 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 MRPL21Q7Z2W9 205 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM122BQ7Z309 247 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 GPR142Q7Z601 462 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 MOB3BQ86TA1 216 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ERI1Q8IV48 349 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR2L13Q8N349 312 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CIARTQ8N365 385 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR4F6Q8NGB9 312 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR4C3Q8NH37 302 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 C8orf46Q8TAG6 207 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 MAGEC3Q8TD91 643 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TCP11Q8WWU5 503 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 DLX4Q92988 240 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 C2orf48Q96LS8 159 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TRNT1Q96Q11 434 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 KCNA7Q96RP8 456 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 P2RY13Q9BPV8 354 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 NMRAL1Q9HBL8 299 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ADA2Q9NZK5 511 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF224Q9NZL3 707 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ADAM22Q9P0K1 906 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 PRDM4Q9UKN5 801 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC7A7Q9UM01 511 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 EXOGQ9Y2C4 368 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 AK6Q9Y3D8 172 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 GAKO14976 1311 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 FRMPD4Q14CM0 1322 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ZBED9Q6R2W3 1325 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CACNA1SQ13698 1873 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 RPAP1Q9BWH6 1393 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ARFGEF2Q9Y6D5 1785 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 A0A0J9YVX5 310 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SMCO3A2RU48 225 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR5H15A6NDH6 313 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms