RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MRPS26Q9BYN8 205 aaKnown RBP19.55■□□□□ 0.72
SMC4-221ENST00000489573 POTEKPQ9BYX7 375 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 NDEL1Q9GZM8 345 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 RPH3AQ9Y2J0 694 aaPredicted RBP19.55■□□□□ 0.72
SMC4-221ENST00000489573 TPRKBQ9Y3C4 175 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 KCNMB2Q9Y691 235 aa19.55■□□□□ 0.72
SMC4-221ENST00000489573 TLX2O43763 284 aaPredicted RBP19.54■□□□□ 0.72
SMC4-221ENST00000489573 ZIC3O60481 467 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 PPP1R3DO95685 299 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 TFPIP10646 304 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 ZNF17P17021 662 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 EEF1B2P24534 225 aaKnown RBP19.54■□□□□ 0.72
SMC4-221ENST00000489573 MLLT10P55197 1068 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 FOXO1Q12778 655 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 TMEM44Q2T9K0 475 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 GLYR1Q49A26 553 aaPredicted RBP19.54■□□□□ 0.72
SMC4-221ENST00000489573 GXYLT1Q4G148 440 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 SYT14P1Q58G82 188 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 RAET1LQ5VY80 246 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 SLC25A25Q6KCM7 469 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 HAS2Q92819 552 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 SLC25A36Q96CQ1 311 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 DNAJA3Q96EY1 480 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 C5orf34Q96MH7 638 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 Q96MT0 163 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 GPX7Q96SL4 187 aaPredicted RBP19.54■□□□□ 0.72
SMC4-221ENST00000489573 HES7Q9BYE0 225 aa19.54■□□□□ 0.72
SMC4-221ENST00000489573 KLF13Q9Y2Y9 288 aaPredicted RBP19.54■□□□□ 0.72
SMC4-221ENST00000489573 A0A087WXM4 84 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 SH3D21A4FU49 640 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 MCIDASD6RGH6 385 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 H3BML4 177 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 BLOC1S5-TXNDC5H3BN57 136 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 NME2P1O60361 137 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 SP1P08047 785 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 CD46P15529 392 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 NME2P22392 152 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 FKBP2P26885 142 aaKnown RBP19.53■□□□□ 0.72
SMC4-221ENST00000489573 UQCRC1P31930 480 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 RPL4P36578 427 aaKnown RBP19.53■□□□□ 0.72
SMC4-221ENST00000489573 AQP2P41181 271 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 OCLNQ16625 522 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 SLC25A30Q5SVS4 291 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 DPY19L2P2Q6ZN68 376 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 SULF2Q8IWU5 870 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 MOSPD2Q8NHP6 518 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 MFSD8Q8NHS3 518 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 ARL5BQ96KC2 179 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 PLCXD1Q9NUJ7 323 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 NCOR2Q9Y618 2525 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 FTCDNL1E5RQL4 147 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 CEACAM4O75871 244 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 TSPAN19P0C672 248 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 ATP6V1B1P15313 513 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 IDUAP35475 653 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 MFSD13AQ14CX5 517 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 TOMM20Q15388 145 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 SGCBQ16585 318 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 MEDAGQ5VYS4 303 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 SLC6A19Q695T7 634 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 ARHGAP11AQ6P4F7 1023 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 IGFN1Q86VF2 1251 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 OR5J2Q8NH18 312 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 RELTQ969Z4 430 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 LRR1Q96L50 414 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 UBL7Q96S82 380 aaPredicted RBP19.53■□□□□ 0.72
SMC4-221ENST00000489573 PIGQQ9BRB3 760 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 ASPNQ9BXN1 380 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.53■□□□□ 0.727e-12■■■■■ 38.5
SMC4-221ENST00000489573 KLHL1Q9NR64 748 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 DNAJC27Q9NZQ0 273 aa19.53■□□□□ 0.72
SMC4-221ENST00000489573 MPDZO75970 2070 aa19.52■□□□□ 0.72
SMC4-221ENST00000489573 ENTPD6O75354 484 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 RFPL3SP0C7P2 107 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 PEPDP12955 493 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 GRPRP30550 384 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 CLK1P49759 484 aaKnown RBP19.52■□□□□ 0.71
SMC4-221ENST00000489573 NUDT6P53370 316 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 RPL18Q07020 188 aaKnown RBP19.52■□□□□ 0.71
SMC4-221ENST00000489573 ALG10Q5BKT4 473 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 IGFL2Q6UWQ7 119 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 LRRC75AQ8NAA5 344 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 ERMAPQ96PL5 475 aaPredicted RBP19.52■□□□□ 0.71
SMC4-221ENST00000489573 TAPBPLQ9BX59 468 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 TMEM185BQ9H7F4 350 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 CMC2Q9NRP2 79 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 DKK4Q9UBT3 224 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 B4GALT7Q9UBV7 327 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 SSUH2Q9Y2M2 353 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 GPR52Q9Y2T5 361 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 MRPS18CQ9Y3D5 142 aaKnown RBP19.52■□□□□ 0.71
SMC4-221ENST00000489573 CORINQ9Y5Q5 1042 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 SPTBN2O15020 2390 aa19.52■□□□□ 0.71
SMC4-221ENST00000489573 OR2M5A3KFT3 312 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 PTGES3LE9PB15 166 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 SLC2A10O95528 541 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 GDF1P27539 372 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 GTF2E2P29084 291 aaKnown RBP19.51■□□□□ 0.71
SMC4-221ENST00000489573 TUBA4AP68366 448 aa19.51■□□□□ 0.71
SMC4-221ENST00000489573 OR7A5Q15622 319 aa19.51■□□□□ 0.71
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