RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RNF128Q8TEB7 428 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 ALG12Q9BV10 488 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 NRIP3Q9NQ35 241 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 TUBG2Q9NRH3 451 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 SLC6A14Q9UN76 642 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 KIR2DS5A0A0G2JLQ3 304 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 A0A0G2JNG1 304 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 H3BUI4 141 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 KIR2DS3K7RE56 304 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 ITGB2P05107 769 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 ZNF44P15621 663 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 HTD2P86397 168 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 KIR2DS5Q14953 304 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 RBMS2Q15434 407 aaKnown RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 CCSMST1Q4G0I0 132 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 UBTD2Q8WUN7 234 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 HSD17B8Q92506 261 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 GCDHQ92947 438 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 DVL3Q92997 716 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 HAO2Q9NYQ3 351 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 ARGFXA6NJG6 315 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 POU3F2P20265 443 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 GDF1P27539 372 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 MMP12P39900 470 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 HTR3AP46098 478 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 NOX4Q9NPH5 578 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 TAAR2Q9P1P5 351 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 B4DXG7 233 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 MPPED1O15442 326 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 EFNA3P52797 238 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 DUSP7Q16829 419 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 SIAH3Q8IW03 269 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 LIN37Q96GY3 246 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 RBFOX1Q9NWB1 397 aaKnown RBP16.37■□□□□ 0.21
NPHP4-209ENST00000489180 KLK4Q9Y5K2 254 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 SUSD5O60279 629 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 IGHG1P01857 330 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 FAM160A2Q8N612 972 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 TMEM174Q8WUU8 243 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 VN1R3Q9BXE9 311 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 R3HDMLQ9H3Y0 253 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 PRAMEF27A3QJZ7 478 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 SMIM18P0DKX4 95 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 DRD1P21728 446 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 TACR3P29371 465 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 CD6P30203 668 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 RRAS2P62070 204 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 PRAMEF9Q5VWM5 478 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 LYSMD2Q8IV50 215 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 ASB17Q8WXJ9 295 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 NMNAT2Q9BZQ4 307 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 RNF167Q9H6Y7 350 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 FUCA1P04066 466 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 PPP3CBP16298 524 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 PSMB1P20618 241 aaKnown RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 PTRH1Q86Y79 214 aaKnown RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 L3MBTL4Q8NA19 623 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 OR5D18Q8NGL1 313 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 OR13C9Q8NGT0 318 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 ZFAND1Q8TCF1 268 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 TM4SF18Q96CE8 201 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 SLC22A12Q96S37 553 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 ELF4Q99607 663 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 DNAJB11Q9UBS4 358 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 DIMT1Q9UNQ2 313 aaKnown RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 OR6C65A6NJZ3 312 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 HHLA1C9JL84 531 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 H3BQ06 376 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 MMP2P08253 660 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 ILKQ13418 452 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 ARL5BQ96KC2 179 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 RNF32Q9H0A6 362 aa16.36■□□□□ 0.21
NPHP4-209ENST00000489180 DNMT3BQ9UBC3 853 aaKnown RBP16.36■□□□□ 0.21
NPHP4-209ENST00000489180 HSPB6O14558 160 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 LCMT2O60294 686 aaKnown RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 MT-CO2P00403 227 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 F3P13726 295 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 MELKQ14680 651 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 ARRDC3Q96B67 414 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 HMX2A2RU54 273 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 ZNF264O43296 627 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 OIP5O43482 229 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 FCGR2AP12318 317 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 RAB31Q13636 194 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 ADAM29Q9UKF5 820 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 NRXN3Q9Y4C0 1643 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 RPS10-NUDT3A0A1W2PQS6 291 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 B3GALT4O96024 378 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 OMGP23515 440 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 GCH1P30793 250 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 RPS10P46783 165 aaKnown RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 SRP9P49458 86 aaKnown RBP16.35■□□□□ 0.21
NPHP4-209ENST00000489180 EPHA4P54764 986 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 FOXK2Q01167 660 aa16.35■□□□□ 0.21
NPHP4-209ENST00000489180 CRMP1Q14194 572 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms