RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PROX1Q92786 737 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 NINJ1Q92982 152 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 EPYCQ99645 322 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 MCHR1Q99705 422 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 EFCAB1Q9HAE3 211 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 UPB1Q9UBR1 384 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 PRSS50Q9UI38 385 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 FBN2P35556 2912 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 AQP7P3A6NL99 342 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 ZNF814B7Z6K7 855 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 FXYD1O00168 92 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 DYNC1I1O14576 645 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 AIM2O14862 343 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 FMO6PO60774 539 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 GCM2O75603 506 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-218ENST00000489037 HTR2AP28223 471 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 LSP1P33241 339 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 RPS5P46782 204 aaKnown RBP12.65□□□□□ -0.38
BRCA1-218ENST00000489037 GZMMP51124 257 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 NR1H2P55055 460 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 GNGT1P63211 74 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 SLC17A1Q14916 467 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 MFSD13AQ14CX5 517 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 DUSP7Q16829 419 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 BEX5Q5H9J7 111 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 FBXW9Q5XUX1 488 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 ALKBH2Q6NS38 261 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 SSX8Q7RTT4 187 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.65□□□□□ -0.38
BRCA1-218ENST00000489037 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 HSD17B8Q92506 261 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 NRGNQ92686 78 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 S100PBPQ96BU1 408 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 ARHGDIGQ99819 225 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 HOPXQ9BPY8 73 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-218ENST00000489037 ST6GALNAC2Q9UJ37 374 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 BAG5Q9UL15 447 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 RASD1Q9Y272 281 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 FLVCR1Q9Y5Y0 555 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 TACC2O95359 2948 aa12.65□□□□□ -0.38
BRCA1-218ENST00000489037 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
BRCA1-218ENST00000489037 TRAV36DV7A0A075B6V5 113 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 CIB4A0PJX0 185 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 CCT8L1PA6NM43 557 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 FAM220BPB1ANY3 271 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 M0R3H8 397 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 RAMP1O60894 148 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 NPIPB7O75200 414 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 KEAP1Q14145 624 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 NRF1Q16656 503 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
BRCA1-218ENST00000489037 FAM69AQ5T7M9 428 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF613Q6PF04 617 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 AAED1Q7RTV5 226 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 COMTD1Q86VU5 262 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 OR2T12Q8NG77 320 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 OR9K2Q8NGE7 335 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 VANGL1Q8TAA9 524 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-218ENST00000489037 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 MUCL1Q96DR8 90 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 KTI12Q96EK9 354 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 PRR14Q9BWN1 585 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 RSPO3Q9BXY4 272 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-218ENST00000489037 ASB6Q9NWX5 421 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 DSCAMO60469 2012 aa12.64□□□□□ -0.39
BRCA1-218ENST00000489037 ROS1P08922 2347 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 PDZD2O15018 2839 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 A0A087WUJ7 227 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 A0A0B4J2E0 115 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 A0A1B0GX12 115 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 ELOVL7A1L3X0 281 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 DEFB108AA8MXU0 73 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 SNX3O60493 162 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 LYZL6O75951 148 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 KRT33AO76009 404 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 IGHV3-9P01782 118 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 RAF1P04049 648 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 GGT1P19440 569 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 CD247P20963 164 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 DRD4P21917 467 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 IL1RL1Q01638 556 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 FAPQ12884 760 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 STK11Q15831 433 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 ENTPD8Q5MY95 495 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 PAMR1Q6UXH9 720 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 ABHD12BQ7Z5M8 362 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-218ENST00000489037 P2RY8Q86VZ1 359 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 C10orf53Q8N6V4 93 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 GPR32P1Q8NGA4 272 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 OR6T1Q8NGN1 323 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 TMEM45BQ96B21 275 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 ASPNQ9BXN1 380 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 PLEKHF2Q9H8W4 249 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 PLEKHA6Q9Y2H5 1048 aa12.63□□□□□ -0.39
BRCA1-218ENST00000489037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-218ENST00000489037 OR6C65A6NJZ3 312 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms