RNA–Protein interactions for RNA: ENST00000488883.5

SFI1-225, Transcript of SFI1 centrin binding protein, human

TSL 3

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-225	ENST00000488883	HMGA2	P52926	109 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	CSNK2A1	P68400	391 aa	Predicted RBP	13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	SLC35A1	P78382	337 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	SEC23B	Q15437	767 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	GUSBP1	Q15486	140 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	PODNL1	Q6PEZ8	512 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	C5orf46	Q6UWT4	87 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	CCDC103	Q8IW40	242 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	SLC7A13	Q8TCU3	470 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	RNF128	Q8TEB7	428 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	DUS3L	Q96G46	650 aa	Known RBP	13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	HS6ST2	Q96MM7	605 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	MOGAT1	Q96PD6	335 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	ZNF347	Q96SE7	839 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	ANKRD19P	Q9H560	264 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	C20orf141	Q9NUB4	165 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	VNN3	Q9NY84	501 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883		Q9UFV3	132 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	AURKC	Q9UQB9	309 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	TESMIN	Q9Y4I5	508 aa		13.71	□□□□□ -0.21
SFI1-225	ENST00000488883	TRBV4-1	A0A0J9YWV2	114 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	WIPF3	A6NGB9	483 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	KPNA4	O00629	521 aa	Predicted RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	OR2T1	O43869	369 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	PIP5K1C	O60331	668 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	CYTIP	O60759	359 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	FKBP6	O75344	327 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	AKR7A3	O95154	331 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	SYNGR4	O95473	234 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	IGF2	P01344	180 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	RNF224	P0DH78	156 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	IFNA8	P32881	189 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	ACTR3	P61158	418 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	FOXF2	Q12947	444 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	KPNB1	Q14974	876 aa	Known RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	ZNF74	Q16587	644 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	FAM69A	Q5T7M9	428 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	ABLIM2	Q6H8Q1	611 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	PAQR6	Q6TCH4	344 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	FCRLA	Q7L513	359 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	SLC46A3	Q7Z3Q1	461 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	CCDC71	Q8IV32	467 aa	Predicted RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	LIX1L	Q8IVB5	337 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	TMEM99	Q8N816	258 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	OR4C15	Q8NGM1	316 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	OR52J3	Q8NH60	311 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	EPYC	Q99645	322 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	SEC14L4	Q9UDX3	406 aa		13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	MCTS1	Q9ULC4	181 aa	Known RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	USP9X	Q93008	2570 aa	Predicted RBP	13.7	□□□□□ -0.22
SFI1-225	ENST00000488883	ANKRD65	E5RJM6	399 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	CH25H	O95992	272 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	CBL	P22681	906 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	GRPR	P30550	384 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	RRM2	P31350	389 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	KIR2DL2	P43627	348 aa	Predicted RBP	13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	CTBP2	P56545	445 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	SPIB	Q01892	262 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	CDSN	Q15517	529 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	MBOAT2	Q6ZWT7	520 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	P4HA3	Q7Z4N8	544 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	MEX3D	Q86XN8	651 aa	Known RBP	13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	RNF113B	Q8IZP6	322 aa	Known RBP	13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	LRRC17	Q8N6Y2	441 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	ABHD3	Q8WU67	409 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	INTS12	Q96CB8	462 aa	Known RBP	13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	SLC25A36	Q96CQ1	311 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	TM9SF2	Q99805	663 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	TAPBPL	Q9BX59	468 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	CLEC4A	Q9UMR7	237 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	RNF6	Q9Y252	685 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	MED31	Q9Y3C7	131 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	HIVEP3	Q5T1R4	2406 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	FLNC	Q14315	2725 aa		13.69	□□□□□ -0.22
SFI1-225	ENST00000488883	SH3PXD2B	A1X283	911 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	AQP7P3	A6NL99	342 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	ENO4	A6NNW6	628 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	ZNF716	A6NP11	495 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883		M0R082	166 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	EIF1B	O60739	113 aa	Known RBP	13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	TNFSF13	O75888	250 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	LDLR	P01130	860 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	MAK	P20794	623 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	PRKCD	Q05655	676 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	OR2T5	Q6IEZ7	315 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	PPP4R4	Q6NUP7	873 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	NHLRC1	Q6VVB1	395 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	ZNF730	Q6ZMV8	503 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	NRM	Q8IXM6	262 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	GCNT2	Q8N0V5	402 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	SLC43A2	Q8N370	569 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	OR2T29	Q8NH02	315 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	ZNF417	Q8TAU3	575 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	LIPH	Q8WWY8	451 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	RND1	Q92730	232 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	SGTB	Q96EQ0	304 aa		13.68	□□□□□ -0.22
SFI1-225	ENST00000488883	RSRC1	Q96IZ7	334 aa	Known RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms