RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PMS2P2O95744 297 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 BGLAPP02818 100 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 CPN1P15169 458 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 MAKP20794 623 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 PRKACGP22612 351 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 GRPRP30550 384 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 OMPP47874 163 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 HMGA2P52926 109 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 CTBP2P56545 445 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 CARD18P57730 90 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 NUP107P57740 925 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 SLC35A1P78382 337 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 TRIP10Q15642 601 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 GXYLT1Q4G148 440 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 OTUD3Q5T2D3 398 aaPredicted RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 PGBD2Q6P3X8 592 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 TMPPEQ6ZT21 453 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 SLC46A3Q7Z3Q1 461 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 P4HA3Q7Z4N8 544 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 NANOGNBQ7Z5D8 188 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 STK32CQ86UX6 486 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 ZDHHC13Q8IUH4 622 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 EPHX4Q8IUS5 362 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 CHERPQ8IWX8 916 aaKnown RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 LINC00471Q8N535 108 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 ATG16L2Q8NAA4 619 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 OR13C2Q8NGS9 318 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 MFSD8Q8NHS3 518 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 FAM57AQ8TBR7 257 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 GNPDA2Q8TDQ7 276 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 PHF3Q92576 2039 aaKnown RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 OSTF1Q92882 214 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 GTPBP3Q969Y2 492 aaKnown RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 MIB2Q96AX9 1013 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 TRIB1Q96RU8 372 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 CIB1Q99828 191 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 ASPNQ9BXN1 380 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 PRRG4Q9BZD6 226 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 PRDM14Q9GZV8 571 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 TIGARQ9NQ88 270 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 NANSQ9NR45 359 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 STX18Q9P2W9 335 aaKnown RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 NKX1-2Q9UD57 310 aaPredicted RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 SEC14L4Q9UDX3 406 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 RALYQ9UKM9 306 aaKnown RBP11.05□□□□□ -0.64
TRAIP-209ENST00000488860 DOCK7Q96N67 2140 aa11.05□□□□□ -0.64
TRAIP-209ENST00000488860 TRAV27A0A087WT01 109 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 CLCA1A8K7I4 914 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 M0R082 166 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 PRRG2O14669 202 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 MGRN1O60291 552 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 KLK2P20151 261 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ENPP1P22413 925 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 TLE1Q04724 770 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 LTBQ06643 244 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 PON3Q15166 354 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
TRAIP-209ENST00000488860 LRRC36Q1X8D7 754 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ANKRD34AQ69YU3 496 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 MAMDC2Q7Z304 686 aaPredicted RBP11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ZER1Q7Z7L7 766 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 MED12LQ86YW9 2145 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 LRRC17Q8N6Y2 441 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ST6GALNAC3Q8NDV1 305 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ZNF417Q8TAU3 575 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 FANK1Q8TC84 345 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ROBO4Q8WZ75 1007 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
TRAIP-209ENST00000488860 EME1Q96AY2 570 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 NRBF2Q96F24 287 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ZNF587Q96SQ5 575 aaPredicted RBP11.04□□□□□ -0.64
TRAIP-209ENST00000488860 FEVQ99581 238 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 FKRPQ9H9S5 495 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 PAQR5Q9NXK6 330 aaPredicted RBP11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ZNF229Q9UJW7 825 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 MCTS1Q9ULC4 181 aaKnown RBP11.04□□□□□ -0.64
TRAIP-209ENST00000488860 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
TRAIP-209ENST00000488860 ARRDC5A6NEK1 342 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 UNC119BA6NIH7 251 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 FIGNL2A6NMB9 653 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 FTCDNL1E5RQL4 147 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 CDC42EP2O14613 210 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 EI24O14681 340 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 SLC19A2O60779 497 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 GASTP01350 101 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 PEX2P28328 305 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 RAC3P60763 192 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 SLC34A1Q06495 639 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 PMS2P3Q13401 168 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 MRPL49Q13405 166 aaKnown RBP11.03□□□□□ -0.64
TRAIP-209ENST00000488860 MFSD13AQ14CX5 517 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 ACSF3Q4G176 576 aaPredicted RBP11.03□□□□□ -0.64
TRAIP-209ENST00000488860 SOWAHCQ53LP3 525 aaPredicted RBP11.03□□□□□ -0.64
TRAIP-209ENST00000488860 LPCAT4Q643R3 524 aa11.03□□□□□ -0.64
TRAIP-209ENST00000488860 ZNF770Q6IQ21 691 aaPredicted RBP11.03□□□□□ -0.64
TRAIP-209ENST00000488860 C1orf94Q6P1W5 598 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms